RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 FBXO42Q6P3S6 717 aa4.72□□□□□ -1.65
VLDLR-204ENST00000478776 TAS1R1Q7RTX1 841 aa4.72□□□□□ -1.65
VLDLR-204ENST00000478776 HDGFL2Q7Z4V5 671 aaPredicted RBP4.72□□□□□ -1.65
VLDLR-204ENST00000478776 PPP1R14CQ8TAE6 165 aa4.72□□□□□ -1.65
VLDLR-204ENST00000478776 COQ10AQ96MF6 247 aa4.72□□□□□ -1.65
VLDLR-204ENST00000478776 SLKQ9H2G2 1235 aaPredicted RBP4.72□□□□□ -1.65
VLDLR-204ENST00000478776 SBNO2Q9Y2G9 1366 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 GSG1L2A8MUP6 293 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 LEFTY2O00292 366 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 POU3F2P20265 443 aaPredicted RBP4.71□□□□□ -1.66
VLDLR-204ENST00000478776 MASP1P48740 699 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 CLK3P49761 638 aaKnown RBP4.71□□□□□ -1.66
VLDLR-204ENST00000478776 ELLP55199 621 aaPredicted RBP4.71□□□□□ -1.66
VLDLR-204ENST00000478776 BLOC1S1P78537 153 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 APBA1Q02410 837 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 NXPE1Q8N323 547 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 CPEB3Q8NE35 698 aaKnown RBP4.71□□□□□ -1.66
VLDLR-204ENST00000478776 GAB3Q8WWW8 586 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 CDC5LQ99459 802 aaKnown RBP4.71□□□□□ -1.66
VLDLR-204ENST00000478776 RNF181Q9P0P0 153 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 MSRAQ9UJ68 235 aa4.71□□□□□ -1.66
VLDLR-204ENST00000478776 UNC119BA6NIH7 251 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 ZNF891A8MT65 544 aaPredicted RBP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 PDE8AO60658 829 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 CLEC2LP0C7M8 214 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 RBP3P10745 1247 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 DDX6P26196 483 aaKnown RBP eCLIP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 SEC24CP53992 1094 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 MGAT5Q09328 741 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 LRRC32Q14392 662 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 SEPT7Q16181 437 aaKnown RBP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 BEAN1Q3B7T3 259 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 PRR16Q569H4 304 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 EFCAB12Q6NXP0 572 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 THNSL2Q86YJ6 484 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 UBR7Q8N806 425 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 OR10H5Q8NGA6 315 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 SPATA5L1Q9BVQ7 753 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 R3HDMLQ9H3Y0 253 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 ZMAT4Q9H898 229 aa4.7□□□□□ -1.66
VLDLR-204ENST00000478776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 H2AFY2Q9P0M6 372 aaPredicted RBP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 EPN1Q9Y6I3 576 aaPredicted RBP4.7□□□□□ -1.66
VLDLR-204ENST00000478776 PIPSLA2A3N6 862 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 ELL2O00472 640 aaPredicted RBP4.69□□□□□ -1.66
VLDLR-204ENST00000478776 ATP2A2P16615 1042 aaKnown RBP4.69□□□□□ -1.66
VLDLR-204ENST00000478776 GPR15P49685 360 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 TAF7LQ5H9L4 462 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 COLEC12Q5KU26 742 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 ABHD17BQ5VST6 288 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 DRICH1Q6PGQ1 229 aaPredicted RBP4.69□□□□□ -1.66
VLDLR-204ENST00000478776 GLB1L2Q8IW92 636 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 PPM1KQ8N3J5 372 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 EFHBQ8N7U6 833 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 CAGE1Q8TC20 777 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 LEO1Q8WVC0 666 aaPredicted RBP4.69□□□□□ -1.66
VLDLR-204ENST00000478776 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 ORAI3Q9BRQ5 295 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 SYBUQ9NX95 663 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 KCNG1Q9UIX4 513 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 CHST2Q9Y4C5 530 aa4.69□□□□□ -1.66
VLDLR-204ENST00000478776 B5MCH6 92 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 PRAMEF4O60810 478 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 F2P00734 622 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 C1RP00736 705 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 ZSCAN20P17040 1043 aaPredicted RBP4.68□□□□□ -1.66
VLDLR-204ENST00000478776 EPHA10Q5JZY3 1008 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 CREB3L3Q68CJ9 461 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 GPRIN1Q7Z2K8 1008 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 RNF180Q86T96 592 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 KIF18BQ86Y91 864 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 MSL3Q8N5Y2 521 aaKnown RBP4.68□□□□□ -1.66
VLDLR-204ENST00000478776 BOLLQ8N9W6 283 aaKnown RBP4.68□□□□□ -1.66
VLDLR-204ENST00000478776 SLC9A6Q92581 669 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 TFAP2CQ92754 450 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 MAPRE3Q9UPY8 281 aa4.68□□□□□ -1.66
VLDLR-204ENST00000478776 COL11A2P13942 1736 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 KPNA1P52294 538 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 DSG1Q02413 1049 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 RESTQ13127 1097 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 MPP3Q13368 585 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 SART3Q15020 963 aaKnown RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 UBE3CQ15386 1083 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 SPDYE7PQ495Y7 208 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 PDCD4Q53EL6 469 aaKnown RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 ARMC6Q6NXE6 501 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 PDZD4Q76G19 769 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 STRA8Q7Z7C7 330 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 CHTF18Q8WVB6 975 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 ZNF496Q96IT1 587 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 TEX101Q9BY14 249 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 THG1LQ9NWX6 298 aaKnown RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 MAP3K2Q9Y2U5 619 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 USP15Q9Y4E8 981 aaPredicted RBP4.67□□□□□ -1.66
VLDLR-204ENST00000478776 FPGT-TNNI3KV9GXZ4 949 aa4.67□□□□□ -1.66
VLDLR-204ENST00000478776 SHROOM4Q9ULL8 1493 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms