RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GBP3Q9H0R5 595 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 RSAD1Q9HA92 442 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 MAGEF1Q9HAY2 307 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TYW1Q9NV66 732 aaKnown RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 PANK4Q9NVE7 773 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 KBTBD4Q9NVX7 518 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 PARP2Q9UGN5 583 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 GDAQ9Y2T3 454 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 A0A1W2PQD8 194 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF623O75123 536 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ZC3H11AO75152 810 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 GCNT3O95395 438 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 SLFN14P0C7P3 912 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 GAP43P17677 238 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 MLH1P40692 756 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 LIG4P49917 911 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 OSTNP61366 133 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ERVK-21P61565 698 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 COASYQ13057 564 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 DCAF4L1Q3SXM0 396 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ZC2HC1CQ53FD0 456 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-215ENST00000478531 CCDC65Q8IXS2 484 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 URGCPQ8TCY9 931 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 HPS3Q969F9 1004 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ZFP42Q96MM3 310 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TCHPQ9BT92 498 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 LRRC27Q9C0I9 530 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 KLK14Q9P0G3 267 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 KCNG1Q9UIX4 513 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 TBX20Q9UMR3 447 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 HPSEQ9Y251 543 aa7.57□□□□□ -1.2
BRCA1-215ENST00000478531 ARL5CA6NH57 179 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 OFD1O75665 1012 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 RECQL4O94761 1208 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 POMCP01189 267 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 LINC00271P0C7V0 271 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 MYBP10242 640 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 SCNN1GP51170 649 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CASP5P51878 434 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CUL4BQ13620 913 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CSPP1Q1MSJ5 1256 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 NOMO2Q5JPE7 1267 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 LRRC55Q6ZSA7 311 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 MRPL10Q7Z7H8 261 aaKnown RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CNNM3Q8NE01 707 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CLP1Q92989 425 aaKnown RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 ZBTB45Q96K62 511 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 RPS6KC1Q96S38 1066 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 FIZ1Q96SL8 496 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 GAD1Q99259 594 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 NTPCRQ9BSD7 190 aaKnown RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 MRPL9Q9BYD2 267 aaKnown RBP7.56□□□□□ -1.2
BRCA1-215ENST00000478531 FGFBP2Q9BYJ0 223 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 CDT1Q9H211 546 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 TBC1D13Q9NVG8 400 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 SNTG2Q9NY99 539 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 TNFSF13BQ9Y275 285 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 ANK1P16157 1881 aa7.56□□□□□ -1.2
BRCA1-215ENST00000478531 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 TOM1L1O75674 476 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 BMPR1AP36894 532 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 ADGRE1Q14246 886 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 SEZ6Q53EL9 994 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF720Q7Z2F6 126 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 THNSL1Q8IYQ7 743 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 CEP120Q8N960 986 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 COLGALT1Q8NBJ5 622 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 PAGE5Q96GU1 130 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 SAMD11Q96NU1 681 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 FAM193BQ96PV7 902 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-215ENST00000478531 C7orf25Q9BPX7 421 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 C11orf84Q9BUA3 381 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-215ENST00000478531 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 CWH43Q9H720 699 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 ALG13Q9NP73 1137 aaKnown RBP7.55□□□□□ -1.2
BRCA1-215ENST00000478531 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 PCDHB12Q9Y5F1 795 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 TISP43B9A030 160 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 CLDN3O15551 220 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GTPBP6O43824 516 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-215ENST00000478531 ZNF202O95125 648 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 PRR29P0C7W0 189 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 LAG3P18627 525 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GTF2BQ00403 316 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 KCNA1Q09470 495 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 GPM6BQ13491 265 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 FAM26FQ5R3K3 315 aa7.55□□□□□ -1.2
BRCA1-215ENST00000478531 UNC13DQ70J99 1090 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms