RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GAS7O60861 476 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 SPATA31D3P0C874 917 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 EGR2P11161 476 aaPredicted RBP4.88□□□□□ -1.63
HPS3-205ENST00000478525 XPAP23025 273 aaPredicted RBP4.88□□□□□ -1.63
HPS3-205ENST00000478525 PPARAQ07869 468 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 UBE3CQ15386 1083 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 ERCC6LQ2NKX8 1250 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 CCDC178Q5BJE1 867 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
HPS3-205ENST00000478525 ABHD17BQ5VST6 288 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 SPATA31D4Q6ZUB0 917 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 LRFN3Q9BTN0 628 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 MS4A5Q9H3V2 200 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 KANSL2Q9H9L4 492 aa4.88□□□□□ -1.63
HPS3-205ENST00000478525 THG1LQ9NWX6 298 aaKnown RBP4.88□□□□□ -1.63
HPS3-205ENST00000478525 PRSS38A1L453 326 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 KPNA6O60684 536 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 PRAMEF4O60810 478 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 ESRRBO95718 433 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 F2P00734 622 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 NRG3P56975 720 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 PABPC4Q13310 644 aaKnown RBP eCLIP4.87□□□□□ -1.63
HPS3-205ENST00000478525 SOGA3Q5TF21 947 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 METRNLQ641Q3 311 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 GLB1L2Q8IW92 636 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 SLC44A3Q8N4M1 653 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 TFAP2CQ92754 450 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 CDC5LQ99459 802 aaKnown RBP4.87□□□□□ -1.63
HPS3-205ENST00000478525 IFT57Q9NWB7 429 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 POGKQ9P215 609 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 EVLQ9UI08 416 aaPredicted RBP4.87□□□□□ -1.63
HPS3-205ENST00000478525 FRMD4BQ9Y2L6 1034 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 USP15Q9Y4E8 981 aaPredicted RBP4.87□□□□□ -1.63
HPS3-205ENST00000478525 PPP2R3BQ9Y5P8 575 aa4.87□□□□□ -1.63
HPS3-205ENST00000478525 FAM83GA6ND36 823 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 TBKBP1A7MCY6 615 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
HPS3-205ENST00000478525 E9PSI1 815 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 TMEM127O75204 238 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 ITGA10O75578 1167 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 C1RP00736 705 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 ERBB2P04626 1255 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 HLA-DOAP06340 250 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 LTA4HP09960 611 aaKnown RBP4.86□□□□□ -1.63
HPS3-205ENST00000478525 CLEC2LP0C7M8 214 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 RBP3P10745 1247 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 ITGAMP11215 1152 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 MGAT1P26572 445 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 MPLP40238 635 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 SCAPQ12770 1279 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 RESTQ13127 1097 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 MPP3Q13368 585 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 SP5Q6BEB4 398 aaPredicted RBP4.86□□□□□ -1.63
HPS3-205ENST00000478525 EFCAB12Q6NXP0 572 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 PASD1Q8IV76 773 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 MDM1Q8TC05 714 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 NELL1Q92832 810 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 CEP95Q96GE4 821 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
HPS3-205ENST00000478525 TMPRSS11EQ9UL52 423 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
HPS3-205ENST00000478525 ARHGEF17Q96PE2 2063 aaPredicted RBP4.85□□□□□ -1.63
HPS3-205ENST00000478525 RFPL3O75679 317 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 ELLP55199 621 aaPredicted RBP4.85□□□□□ -1.63
HPS3-205ENST00000478525 BMT2Q1RMZ1 405 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 ZNF362Q5T0B9 420 aaPredicted RBP4.85□□□□□ -1.63
HPS3-205ENST00000478525 GPR158Q5T848 1215 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 ABHD15Q6UXT9 468 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 KIF18BQ86Y91 864 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 LYSMD2Q8IV50 215 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 SLC41A1Q8IVJ1 513 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 SPATA5L1Q9BVQ7 753 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 PRDM12Q9H4Q4 367 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 TESQ9UGI8 421 aaKnown RBP4.85□□□□□ -1.63
HPS3-205ENST00000478525 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 CDK11AQ9UQ88 783 aaPredicted RBP4.85□□□□□ -1.63
HPS3-205ENST00000478525 SALL3Q9BXA9 1300 aa4.85□□□□□ -1.63
HPS3-205ENST00000478525 MAST3O60307 1309 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 CDKL5O76039 1030 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 ASMTLO95671 621 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 CFIP05156 583 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 MANFP55145 182 aaKnown RBP4.84□□□□□ -1.63
HPS3-205ENST00000478525 PHC1P78364 1004 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 TRIM25Q14258 630 aaKnown RBP4.84□□□□□ -1.63
HPS3-205ENST00000478525 DDB1Q16531 1140 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 ZNF610Q8N9Z0 462 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 SH3TC2Q8TF17 1288 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 RNF181Q9P0P0 153 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 PRSS50Q9UI38 385 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 NUMBLQ9Y6R0 609 aa4.84□□□□□ -1.63
HPS3-205ENST00000478525 MGST3O14880 152 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 FDXRP22570 491 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 KPNA1P52294 538 aaPredicted RBP4.83□□□□□ -1.64
HPS3-205ENST00000478525 CHN2P52757 468 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 MEF2AQ02078 507 aaPredicted RBP4.83□□□□□ -1.64
HPS3-205ENST00000478525 BMS1Q14692 1282 aaKnown RBP4.83□□□□□ -1.64
HPS3-205ENST00000478525 C19orf54Q5BKX5 351 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms