RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 EXOC3O60645 756 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 PDE8AO60658 829 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 AKAP3O75969 853 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 PSMG1O95456 288 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 ASMTLO95671 621 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 TTLL1O95922 423 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 AMPD1P23109 780 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 HOXD13P35453 343 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 COILP38432 576 aaPredicted RBP10.52□□□□□ -0.73
COL13A1-207ENST00000478219 TFAP4Q01664 338 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 CDR2Q01850 454 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 STRN3Q13033 797 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 SIX1Q15475 284 aaPredicted RBP10.52□□□□□ -0.73
COL13A1-207ENST00000478219 ACBD5Q5T8D3 534 aaPredicted RBP10.52□□□□□ -0.73
COL13A1-207ENST00000478219 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 GALNT17Q6IS24 598 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 ARHGEF18Q6ZSZ5 1173 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DDX17Q92841 729 aaKnown RBP10.52□□□□□ -0.73
COL13A1-207ENST00000478219 DYNLL2Q96FJ2 89 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 ZHX3Q9H4I2 956 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 UBN1Q9NPG3 1134 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 ARL8BQ9NVJ2 186 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 NKIRAS1Q9NYS0 192 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 KANSL3Q9P2N6 904 aa10.52□□□□□ -0.73
COL13A1-207ENST00000478219 TTC4O95801 387 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 FAM200BP0CF97 657 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 GRIA2P42262 883 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 GRM4Q14833 912 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 TMEM119Q4V9L6 283 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 HERC4Q5GLZ8 1057 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 TRMT10CQ7L0Y3 403 aaKnown RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 EPM2AIP1Q7L775 607 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 SH3TC2Q8TF17 1288 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 FBXO41Q8TF61 875 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 CTNNBL1Q8WYA6 563 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 GRAMD1AQ96CP6 724 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 DNAJC1Q96KC8 554 aaKnown RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 RUNDC3BQ96NL0 473 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 HAPLN3Q96S86 360 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 FAM192AQ9GZU8 254 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 PDP2Q9P2J9 529 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 TOM1O60784 492 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 RNASEH1O60930 286 aaKnown RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 OR6B1O95007 311 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 TMEM253P0C7T8 217 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 AP1B1Q10567 949 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 DDB1Q16531 1140 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 PPP2R5EQ16537 467 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 RHBDF2Q6PJF5 856 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 FOXR2Q6PJQ5 311 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 KRT25Q7Z3Z0 450 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 CLNKQ7Z7G1 428 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 SESTD1Q86VW0 696 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 C1orf54Q8WWF1 131 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 ZNF184Q99676 751 aaPredicted RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 SEPT11Q9NVA2 429 aaKnown RBP10.51□□□□□ -0.73
COL13A1-207ENST00000478219 NINJ2Q9NZG7 142 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 PARP2Q9UGN5 583 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 ADGRA3Q8IWK6 1321 aa10.51□□□□□ -0.73
COL13A1-207ENST00000478219 COL4A1P02462 1669 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 RASA4BC9J798 803 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 GSC2O15499 205 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 RASA4O43374 803 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 EDF1O60869 148 aaKnown RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 PENKP01210 267 aaPredicted RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 TMED2Q15363 201 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 TMEM266Q2M3C6 531 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 RINLQ6ZS11 566 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 NLRP9Q7RTR0 991 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 OTOAQ7RTW8 1153 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 LCA5Q86VQ0 697 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 ZC3H3Q8IXZ2 948 aaKnown RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 C9orf72Q96LT7 481 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 SYT11Q9BT88 431 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 PHACTR1Q9C0D0 580 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 ASCC2Q9H1I8 757 aaPredicted RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 NPHS2Q9NP85 383 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 SLAIN2Q9P270 581 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 ZFP69BQ9UJL9 534 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 DCTN4Q9UJW0 460 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 SLIT2O94813 1529 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 FAM47DPA6NHR8 397 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 DCTN3O75935 186 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms