RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 TRIB2Q92519 343 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 SCN1AP35498 2009 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 LENG1Q96BZ8 264 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 APOBEC3GQ9HC16 384 aaKnown RBP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 ACKR2O00590 384 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 EFNA5P52803 228 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 LRRC71Q8N4P6 559 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 PCDHA13Q9Y5I0 950 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 NCANO14594 1321 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SOX5P35711 763 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 MYL7Q01449 175 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TRAPPC11Q7Z392 1133 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 KAT5Q92993 513 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 GABRQQ9UN88 632 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 B4GALT5O43286 388 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 EXOC3O60645 756 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 GFPT2O94808 682 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TNFSF9P41273 254 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 GJA9P57773 515 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SYT10Q6XYQ8 523 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 PALB2Q86YC2 1186 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 FAM84AQ96KN4 292 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TARS2Q9BW92 718 aaKnown RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TNFSF13BQ9Y275 285 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 ZC3H11AO75152 810 aaKnown RBP eCLIP13.17□□□□□ -0.36e-6■□□□□ 11.2
PRPF39-203ENST00000477626 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 MARK3P27448 753 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 PURAQ00577 322 aaKnown RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SREBF2Q12772 1141 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 RSRC2Q7L4I2 434 aaKnown RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
PRPF39-203ENST00000477626 SUCLA2Q9P2R7 463 aaPredicted RBP13.17□□□□□ -0.3
PRPF39-203ENST00000477626 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 CCDC169A6NNP5 214 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 H3BRB1 525 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TOM1L1O75674 476 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 DCAF17Q5H9S7 520 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 SFMBT2Q5VUG0 894 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 EFCAB12Q6NXP0 572 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 CAPN6Q9Y6Q1 641 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 ASAP2O43150 1006 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TPM2P07951 284 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GCNT1Q02742 428 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 XKR4Q5GH76 650 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 CGRRF1Q99675 332 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 FOXN3O00409 490 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 EVI5O60447 810 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TSPAN1O60635 241 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GCLMP48507 274 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 CLCN3P51790 818 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GRIK4Q16099 956 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 ENOX2Q16206 610 aaKnown RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 TMEM192Q8IY95 271 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 NAGPAQ9UK23 515 aa13.16□□□□□ -0.3
PRPF39-203ENST00000477626 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
PRPF39-203ENST00000477626 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
PRPF39-203ENST00000477626 KLRC1P26715 233 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 CST5P28325 142 aaPredicted RBP13.15□□□□□ -0.3
PRPF39-203ENST00000477626 NAB2Q15742 525 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms