RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 SYT3Q9BQG1 590 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 IDI2Q9BXS1 227 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 GLIS2Q9BZE0 524 aaPredicted RBP5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 NAPBQ9H115 298 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 GBA2Q9HCG7 927 aaPredicted RBP5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 CABP5Q9NP86 173 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 GPRC5CQ9NQ84 441 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 SMPD4Q9NXE4 827 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 NUDT5Q9UKK9 219 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 SLC4A4Q9Y6R1 1079 aa5.32□□□□□ -1.56
NSMCE4A-208ENST00000477289 RAD50Q92878 1312 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SALL3Q9BXA9 1300 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SHTN1A0MZ66 631 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 GPAA1O43292 621 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 NPHS1O60500 1241 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 CDC45O75419 566 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 KCNH1O95259 989 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 C8BP07358 591 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 MCCP23508 829 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 ECE1P42892 770 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 DYNLL1P63167 89 aaKnown RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SCRN1Q12765 414 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 APOBEC3HQ6NTF7 200 aaKnown RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 GIMAP6Q6P9H5 292 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 CWC27Q6UX04 472 aaKnown RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 FOXP4Q8IVH2 680 aaPredicted RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 MAPKAPK5Q8IW41 473 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 LINC00482Q8N8I6 264 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SH3RF3Q8TEJ3 882 aaPredicted RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 CDCA5Q96FF9 252 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZBED3Q96IU2 234 aaPredicted RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 MMP19Q99542 508 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 LGR4Q9BXB1 951 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZNF341Q9BYN7 854 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 ARMT1Q9H993 441 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 TOMM22Q9NS69 142 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 MCM9Q9NXL9 1143 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 PI4KBQ9UBF8 816 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 ARPP21Q9UBL0 812 aaPredicted RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 HERC5Q9UII4 1024 aaKnown RBP5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 PSME4Q14997 1843 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SCN9AQ15858 1988 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 SRCAPQ6ZRS2 3230 aa5.31□□□□□ -1.56
NSMCE4A-208ENST00000477289 CCDC171Q6TFL3 1326 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 UNCXA6NJT0 531 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ADM5C9JUS6 153 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZNF213O14771 459 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 REC8O95072 547 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ITGB3P05106 788 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 THBDP07204 575 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 SARSP49591 514 aaKnown RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 NT5C2P49902 561 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 CACNB3P54284 484 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 C1QTNF8P60827 252 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 TRDNQ13061 729 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 PRKG1Q13976 671 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 IMMTQ16891 758 aaKnown RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 INF2Q27J81 1249 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZNF761Q86XN6 746 aaPredicted RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ANKRD13AQ8IZ07 590 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZNF444Q8N0Y2 327 aaPredicted RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 LCORLQ8N3X6 602 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 BVESQ8NE79 360 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 DDX1Q92499 740 aaKnown RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 SEC16BQ96JE7 1060 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 GORASP1Q9BQQ3 440 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 OSBPL5Q9H0X9 879 aaPredicted RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 RNF41Q9H4P4 317 aaPredicted RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 AS3MTQ9HBK9 375 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 SWAP70Q9UH65 585 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 SAP30BPQ9UHR5 308 aaKnown RBP5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 SERPINB13Q9UIV8 391 aa5.3□□□□□ -1.56
NSMCE4A-208ENST00000477289 MAST2Q6P0Q8 1798 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 FLT1P17948 1338 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 MYH2Q9UKX2 1941 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 TCRBV5S4A2TA0A5A2 114 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 C1QTNF3-AMACRE9PGA6 284 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 ARNTLO00327 626 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 MPHOSPH10O00566 681 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 SGSM2O43147 1006 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 PCP11498 1178 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZKSCAN1P17029 563 aaPredicted RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CHMLP26374 656 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CNR2P34972 360 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 HUNKP57058 714 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 RHBDL3P58872 404 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 GRM1Q13255 1194 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 SMAD4Q13485 552 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 DEFB115Q30KQ5 88 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CCDC178Q5BJE1 867 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CPZQ66K79 652 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 GTF2IRD2BQ6EKJ0 949 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 OTUD7BQ6GQQ9 843 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms