RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 QRICH1Q2TAL8 776 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 RFWD2Q8NHY2 731 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 CCDC151A5D8V7 595 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 NT5C2P49902 561 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 GSPT2Q8IYD1 628 aaKnown RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 PROM2Q8N271 834 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 MARCH10Q8NA82 808 aaPredicted RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 OXER1Q8TDS5 423 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 PDHA1P08559 390 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 GPS1Q13098 491 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 ANKRD40Q6AI12 368 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 SPATA2LQ8IUW3 424 aaPredicted RBP19.68■□□□□ 0.74
VARS2-209ENST00000477288 AIPL1Q9NZN9 384 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 SENP1Q9P0U3 644 aa19.68■□□□□ 0.74
VARS2-209ENST00000477288 HMGCS2P54868 508 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PDXDC1Q6P996 788 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PGBD3Q8N328 593 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 GPD1LQ8N335 351 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 RUBCNLQ9H714 662 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 IQCA1LA6NCM1 817 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 GRM4Q14833 912 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 E2F4Q16254 413 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 LRRC8EQ6NSJ5 796 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 RFX8Q6ZV50 586 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PPP1R36Q96LQ0 422 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 ZNF560Q96MR9 790 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 ZC3H4Q9UPT8 1303 aaKnown RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 CYBBP04839 570 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 NOP53Q9NZM5 478 aaKnown RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 HAUS5O94927 633 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PDIA2Q13087 525 aaKnown RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 ENAHQ8N8S7 591 aaPredicted RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 TSC22D3Q99576 134 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 SLC9A2Q9UBY0 812 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PIK3R2O00459 728 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 CYP27B1O15528 508 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 PMS2P54278 862 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 BCAR1P56945 870 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 NECTIN1Q15223 517 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 TEDDM1Q5T9Z0 273 aa19.67■□□□□ 0.74
VARS2-209ENST00000477288 MRPL40Q9NQ50 206 aaKnown RBP19.67■□□□□ 0.74
VARS2-209ENST00000477288 CDKL3Q8IVW4 592 aaPredicted RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 RAB42Q8N4Z0 105 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 CPDO75976 1380 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 PRCPP42785 496 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 TXNP10599 105 aaKnown RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 EN1Q05925 392 aaPredicted RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 DRAP1Q14919 205 aaPredicted RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 ZBED8Q8IZ13 594 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 DCUN1D1Q96GG9 259 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 AGO2Q9UKV8 859 aaKnown RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 UPP2O95045 317 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 KRT7P08729 469 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 EMBQ6PCB8 327 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 ANKS3Q6ZW76 656 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 FAM161BQ96MY7 647 aa19.66■□□□□ 0.74
VARS2-209ENST00000477288 EIF2AK1Q9BQI3 630 aaKnown RBP19.66■□□□□ 0.74
VARS2-209ENST00000477288 KBTBD13C9JR72 458 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 ARHGEF9O43307 516 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 ATP9BO43861 1147 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 PMS1P54277 932 aaKnown RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 MAGOHP61326 146 aaKnown RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 UBE3AQ05086 875 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 TJAP1Q5JTD0 557 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 FAM96AQ9H5X1 160 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 PCDHGB4Q9UN71 923 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 CTSHP09668 335 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 CUL4AQ13619 759 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 PPHLN1Q8NEY8 458 aaKnown RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 EIF4E1BA6NMX2 242 aaKnown RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 LGALS16A8MUM7 142 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 ANKRD65E5RJM6 399 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 NCK2O43639 380 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 COPB2P35606 906 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 TXNRD1Q16881 649 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 RNF149Q8NC42 400 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 ARL8AQ96BM9 186 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 FTLP02792 175 aaPredicted RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 MTMR2Q13614 643 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 SH3TC2Q8TF17 1288 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 BTN2A2Q8WVV5 523 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 LBHD1Q9BQE6 289 aaPredicted RBP19.65■□□□□ 0.74
VARS2-209ENST00000477288 SPDYE5A6NIY4 337 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 CDK17Q00537 523 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 SPDYE7PQ495Y7 208 aa19.65■□□□□ 0.74
VARS2-209ENST00000477288 KRT72Q14CN4 511 aa19.64■□□□□ 0.74
VARS2-209ENST00000477288 EXOC4Q96A65 974 aa19.64■□□□□ 0.74
VARS2-209ENST00000477288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.64■□□□□ 0.74
VARS2-209ENST00000477288 CDC42BPAQ5VT25 1732 aa19.64■□□□□ 0.74
VARS2-209ENST00000477288 LMBRD2Q68DH5 695 aaPredicted RBP19.64■□□□□ 0.73
VARS2-209ENST00000477288 DDX56Q9NY93 547 aaKnown RBP19.64■□□□□ 0.73
VARS2-209ENST00000477288 PPP2R3CQ969Q6 453 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 OTUB1Q96FW1 271 aaPredicted RBP19.64■□□□□ 0.73
VARS2-209ENST00000477288 ABHD10Q9NUJ1 306 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 BFARQ9NZS9 450 aa19.64■□□□□ 0.73
VARS2-209ENST00000477288 TADA2AO75478 443 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms