RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 RMDN2Q96LZ7 410 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 SIX2Q9NPC8 291 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 WDR35Q9P2L0 1181 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 GGT7Q9UJ14 662 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 PPP1R9AQ9ULJ8 1098 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
CLSTN1-205ENST00000477264 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 DCTN3O75935 186 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 STX2P32856 288 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 SLCO1A2P46721 670 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 YARSP54577 528 aaKnown RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 TCEAL1Q15170 157 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 GNPTABQ3T906 1256 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 SESTD1Q86VW0 696 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 LNX1Q8TBB1 728 aaPredicted RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 DNAJC9Q8WXX5 260 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 UTP4Q969X6 686 aaKnown RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 NAP1L4Q99733 375 aaKnown RBP16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 NKIRAS1Q9NYS0 192 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 RGL1Q9NZL6 768 aa16.35■□□□□ 0.21
CLSTN1-205ENST00000477264 COL4A5P29400 1685 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 PDLIM1O00151 329 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 TRIM4Q9C037 500 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 DBR1Q9UK59 544 aaKnown RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 MTUS1Q9ULD2 1270 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 USH1CQ9Y6N9 552 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 NFKBIEO00221 500 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 SLC37A4O43826 429 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 CALCOCO2Q13137 446 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 LRRC14Q15048 493 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 HERC4Q5GLZ8 1057 aaPredicted RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 PPP1R18Q6NYC8 613 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 ECHDC2Q86YB7 292 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 MGARPQ8TDB4 240 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 C18orf8Q96DM3 657 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 OSGEPQ9NPF4 335 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 WHRNQ9P202 907 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 NKX1-2Q9UD57 310 aaPredicted RBP16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 LRCH1Q9Y2L9 728 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
CLSTN1-205ENST00000477264 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 SOX5P35711 763 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 ADCY7P51828 1080 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 CUL3Q13618 768 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 SDCCAG8Q86SQ7 713 aaPredicted RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 VSIG1Q86XK7 387 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 PRELID2Q8N945 189 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 NUDCD1Q96RS6 583 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 DCLRE1BQ9H816 532 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 STOML1Q9UBI4 398 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 TRIM33Q9UPN9 1127 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 PDXKO00764 312 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 MGAT5Q09328 741 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 CGB2Q6NT52 195 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 TMEM154Q6P9G4 183 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 CCDC137Q6PK04 289 aaKnown RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 DDX4Q9NQI0 724 aaKnown RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 SCOCQ9UIL1 159 aa16.33■□□□□ 0.2
CLSTN1-205ENST00000477264 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 MAPK13O15264 365 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 TDP2O95551 362 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 CDK8P49336 464 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 IL9RQ01113 521 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 LAMB3Q13751 1172 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 MUM1Q2TAK8 710 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 CIAPIN1Q6FI81 312 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 RIBC1Q8N443 379 aaPredicted RBP16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 ANKRD42Q8N9B4 389 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 FAM13CQ8NE31 585 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 AGBL3Q8NEM8 1001 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 KIFAP3Q92845 792 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 SLCO2A1Q92959 643 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 RPS6KC1Q96S38 1066 aa16.32■□□□□ 0.2
CLSTN1-205ENST00000477264 SYT11Q9BT88 431 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms