RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 GUCY1A3Q02108 690 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 SMAD2Q15796 467 aaKnown RBP6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 LONRF2Q1L5Z9 754 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 SKIDA1Q1XH10 827 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 LRRC24Q50LG9 513 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 PHF19Q5T6S3 580 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 CD276Q5ZPR3 534 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 HHIPL2Q6UWX4 724 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 C15orf52Q6ZUT6 534 aaKnown RBP6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 NBPF5PQ86XG9 351 aaPredicted RBP6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 NLGN4XQ8N0W4 816 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 SYNE4Q8N205 404 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 KLHL36Q8N4N3 616 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 MPHOSPH8Q99549 860 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 GPR20Q99678 358 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 CD244Q9BZW8 370 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 PDGFDQ9GZP0 370 aaPredicted RBP6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 ANKRD2Q9GZV1 360 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 CATSPERZQ9NTU4 200 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 ZDHHC9Q9Y397 364 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 TELO2Q9Y4R8 837 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 PCDHA8Q9Y5H6 950 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 RAD50Q92878 1312 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 CARMIL3Q8ND23 1372 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 NUP188Q5SRE5 1749 aa6.93□□□□□ -1.3
CDKN1B-204ENST00000477087 MYH14Q7Z406 1995 aaKnown RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 GSTA4O15217 222 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 LAMTOR5O43504 91 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 B4GALT3O60512 393 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 ZFYP08048 801 aaPredicted RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 UQCRFS1P1P0C7P4 283 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 MAGEA10P43363 369 aaPredicted RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 GLRBP48167 497 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 TIMM10P62072 90 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 NFKB2Q00653 900 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 SERINC3Q13530 473 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 RASA3Q14644 834 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 PUM3Q15397 648 aaKnown RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 GPR19Q15760 415 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 TAF7LQ5H9L4 462 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 ZC3H12BQ5HYM0 836 aaKnown RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 BTBD8Q5XKL5 378 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 KBTBD3Q8NAB2 608 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 EXOC2Q96KP1 924 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 CRAMP1Q96RY5 1269 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 PUS3Q9BZE2 481 aaKnown RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 CCDC8Q9H0W5 538 aaPredicted RBP6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 SIL1Q9H173 461 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 CNNM1Q9NRU3 951 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 ZFP69BQ9UJL9 534 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 ARFGEF2Q9Y6D5 1785 aa6.92□□□□□ -1.3
CDKN1B-204ENST00000477087 LY75O60449 1722 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 COL5A3P25940 1745 aaPredicted RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 CHGBP05060 677 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SERPINB2P05120 415 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 IFIT1P09914 478 aaKnown RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SRGAP2CP0DJJ0 459 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 PFKPQ01813 784 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 RBL2Q08999 1139 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 NFATC3Q12968 1075 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 TTF1Q15361 905 aaPredicted RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 CRY1Q16526 586 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 FAM47CQ5HY64 1035 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 METTL24Q5JXM2 366 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 ARHGAP36Q6ZRI8 547 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 ARHGEF18Q6ZSZ5 1173 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 ANKRD18AQ8IVF6 992 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 CHST13Q8NET6 341 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SAMD11Q96NU1 681 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SRPK1Q96SB4 655 aaKnown RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 RBM15Q96T37 977 aaKnown RBP eCLIP6.91□□□□□ -1.32e-7■■■■□ 26.4
CDKN1B-204ENST00000477087 BRIP1Q9BX63 1249 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 HELLSQ9NRZ9 838 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 RIC8BQ9NVN3 520 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 SRP68Q9UHB9 627 aaKnown RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 PDS5AQ29RF7 1337 aaKnown RBP6.91□□□□□ -1.3
CDKN1B-204ENST00000477087 ZNF839A8K0R7 811 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 POLRMTO00411 1230 aaKnown RBP6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 PYGMP11217 842 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 KRT15P19012 456 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 HSPA4P34932 840 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 MCM2P49736 904 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 BECN1Q14457 450 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 RABEP1Q15276 862 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 SLC15A2Q16348 729 aa6.9□□□□□ -1.3
CDKN1B-204ENST00000477087 ATP2B3Q16720 1220 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms