RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CASP8AP2Q9UKL3 1982 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 GPR32O75388 356 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TOM1L1O75674 476 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 RARBP10826 455 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 HOXD10P28358 340 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TMEM62Q0P6H9 643 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 CCSAPQ6IQ19 270 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 ZBTB33Q86T24 672 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 CDR2LQ86X02 465 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 KLHDC9Q8NEP7 349 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TMC2Q8TDI7 906 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 ZNF516Q92618 1163 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 DESI2Q9BSY9 194 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 MSTO1Q9BUK6 570 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TMEM117Q9H0C3 514 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 FAM49AQ9H0Q0 323 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-206ENST00000477085 CEP72Q9P209 647 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 TSKSQ9UJT2 592 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 PLAGL2Q9UPG8 496 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 FHOD1Q9Y613 1164 aa15.72■□□□□ 0.11
COL4A6-206ENST00000477085 ZNF233A6NK53 670 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 CLDN3O15551 220 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 FKTNO75072 461 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 UCHL3P15374 230 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 TNFSF9P41273 254 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 PHKA2P46019 1235 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 CLDN10P78369 228 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 MYL7Q01449 175 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 MCL1Q07820 350 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 FAM187BQ17R55 369 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 KIZQ2M2Z5 673 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 TMTC1Q8IUR5 882 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 XPNPEP3Q9NQH7 507 aa15.71■□□□□ 0.11
COL4A6-206ENST00000477085 PTPRJQ12913 1337 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 HMGCRP04035 888 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PLEKP08567 350 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 CYP2C9P11712 490 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 HARSP12081 509 aaKnown RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 CYP26C1Q6V0L0 522 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 REXO1L1PQ8IX06 675 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 EHBP1Q8NDI1 1231 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 ZNF397Q8NF99 534 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PXYLP1Q8TE99 480 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 SEMA4DQ92854 862 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 INTS2Q9H0H0 1204 aaKnown RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 KIAA1586Q9HCI6 787 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 SAGE1Q9NXZ1 904 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 CNTNAP2Q9UHC6 1331 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 KIAA0391O15091 583 aaKnown RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PMM2O15305 246 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 NRDCO43847 1150 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 KPNA6O60684 536 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 FGFR4P22455 802 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PSMD6Q15008 389 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 KCNA10Q16322 511 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 NBPF20Q3BBV1 942 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 SCARA3Q6AZY7 606 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 IQCEQ6IPM2 695 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 CACNA2D4Q7Z3S7 1137 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 DNAJB3Q8WWF6 145 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PPP1R13BQ96KQ4 1090 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 MAP7D2Q96T17 732 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 KATNAL1Q9BW62 490 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 ARHGAP20Q9P2F6 1191 aa15.7■□□□□ 0.1
COL4A6-206ENST00000477085 GRIN2DO15399 1336 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 C17orf102A2RUQ5 167 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 GNRH1P01148 92 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 DLATP10515 647 aaKnown RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 ENPEPQ07075 957 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 HGSNATQ68CP4 663 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 LMBRD2Q68DH5 695 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 MPZL3Q6UWV2 235 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 SV2AQ7L0J3 742 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 C7orf31Q8N865 590 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 CEP120Q8N960 986 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 CPB2Q96IY4 423 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 TCHPQ9BT92 498 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 PRMT7Q9NVM4 692 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 TNFSF13BQ9Y275 285 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms