RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 CEP89Q96ST8 783 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 LMAN1LQ9HAT1 526 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 AGPAT5Q9NUQ2 364 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 FNIP2Q9P278 1114 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 TCEAL9Q9UHQ7 104 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 LHX6Q9UPM6 363 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 ITPR1Q14643 2758 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 CNTNAP2Q9UHC6 1331 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 NBEAQ8NFP9 2946 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 SRRM3A6NNA2 597 aaPredicted RBP17.25■□□□□ 0.35
SMG5-204ENST00000476954 TOP3BO95985 862 aaKnown RBP17.25■□□□□ 0.35
SMG5-204ENST00000476954 C1RP00736 705 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
SMG5-204ENST00000476954 CCR3P51677 355 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 PPM1LQ5SGD2 360 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 STPG1Q5TH74 334 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 MAMSTRQ6ZN01 415 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
SMG5-204ENST00000476954 MCRS1Q96EZ8 462 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 GAD1Q99259 594 aa17.25■□□□□ 0.35
SMG5-204ENST00000476954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMG5-204ENST00000476954 SUCLA2Q9P2R7 463 aaPredicted RBP17.25■□□□□ 0.35
SMG5-204ENST00000476954 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 NRG2O14511 850 aaPredicted RBP17.24■□□□□ 0.35
SMG5-204ENST00000476954 AXIN1O15169 862 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 C8AP07357 584 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 MLH1P40692 756 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 CXCL12P48061 93 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 SCNN1GP51170 649 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 RTP2Q5QGT7 225 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 TANGO2Q6ICL3 276 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 ZNF410Q86VK4 478 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
SMG5-204ENST00000476954 ARRDC1-AS1Q9H2J1 176 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 SMOC1Q9H4F8 434 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 MINDY3Q9H8M7 445 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 IFT122Q9HBG6 1241 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 DISC1Q9NRI5 854 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 DNMT3BQ9UBC3 853 aaKnown RBP17.24■□□□□ 0.35
SMG5-204ENST00000476954 CACNG4Q9UBN1 327 aa17.24■□□□□ 0.35
SMG5-204ENST00000476954 SEPT9Q9UHD8 586 aaPredicted RBP17.24■□□□□ 0.35
SMG5-204ENST00000476954 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 IGKV6-21A0A0C4DH24 114 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 WDR64B1ANS9 1081 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
SMG5-204ENST00000476954 GIPC1O14908 333 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 ADAM12O43184 909 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 CHMP2AO43633 222 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 PRC1O43663 620 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 ECI2O75521 394 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 STBD1O95210 358 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 CYP3A4P08684 503 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 HNRNPA1P09651 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMG5-204ENST00000476954 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
SMG5-204ENST00000476954 FOXC1Q12948 553 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 GRM2Q14416 872 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 PPP2R5DQ14738 602 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 LIN9Q5TKA1 542 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 CLSTN3Q9BQT9 956 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 OSBPL3Q9H4L5 887 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 C2orf42Q9NWW7 574 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 HES2Q9Y543 173 aa17.23■□□□□ 0.35
SMG5-204ENST00000476954 FOXD2O60548 495 aaPredicted RBP17.22■□□□□ 0.35
SMG5-204ENST00000476954 ITGA4P13612 1032 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 SLC5A9Q2M3M2 681 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 PRR16Q569H4 304 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 CEP68Q76N32 757 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 C12orf50Q8NA57 414 aaPredicted RBP17.22■□□□□ 0.35
SMG5-204ENST00000476954 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 GJA10Q969M2 543 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 LSM14BQ9BX40 385 aaKnown RBP17.22■□□□□ 0.35
SMG5-204ENST00000476954 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
SMG5-204ENST00000476954 WASF3Q9UPY6 502 aa17.22■□□□□ 0.35
SMG5-204ENST00000476954 PDCD11Q14690 1871 aaKnown RBP17.21■□□□□ 0.35
SMG5-204ENST00000476954 K7ESF4 209 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 CALM1P0DP23 149 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 CALM2P0DP24 149 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 CALM3P0DP25 149 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 CDC42EP1Q00587 391 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 HDAC1Q13547 482 aaPredicted RBP17.21■□□□□ 0.35
SMG5-204ENST00000476954 PABPC1LQ4VXU2 614 aaKnown RBP17.21■□□□□ 0.35
SMG5-204ENST00000476954 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 CASC1Q6TDU7 716 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 SLC7A14Q8TBB6 771 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 FAM3CQ92520 227 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 DNASE1L2Q92874 299 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 LENG9Q96B70 501 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 IPPQ9Y573 584 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms