RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
APTX-220ENST00000476858 GBP3Q9H0R5 595 aa13.69□□□□□ -0.22
APTX-220ENST00000476858 CDT1Q9H211 546 aa13.69□□□□□ -0.22
APTX-220ENST00000476858 RSAD1Q9HA92 442 aa13.69□□□□□ -0.22
APTX-220ENST00000476858 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 FAM13AO94988 1023 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 KRT18P05783 430 aaKnown RBP13.68□□□□□ -0.22
APTX-220ENST00000476858 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
APTX-220ENST00000476858 PFKFB1P16118 471 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 POU3F3P20264 500 aaPredicted RBP13.68□□□□□ -0.22
APTX-220ENST00000476858 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
APTX-220ENST00000476858 SLC11A1P49279 550 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 RAB27AP51159 221 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 OSTNP61366 133 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 KRT85P78386 507 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 SPOUT1Q5T280 376 aaKnown RBP13.68□□□□□ -0.22
APTX-220ENST00000476858 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 CCDC73Q6ZRK6 1079 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 SV2BQ7L1I2 683 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 ADGRD2Q7Z7M1 963 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 TIPINQ9BVW5 301 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 BLZF1Q9H2G9 400 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 GDAQ9Y2T3 454 aa13.68□□□□□ -0.22
APTX-220ENST00000476858 UNC80Q8N2C7 3258 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ANKRD63C9JTQ0 380 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 K7ENM7 598 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 PTGESO14684 152 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 N4BP3O15049 544 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
APTX-220ENST00000476858 TRAK2O60296 914 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
APTX-220ENST00000476858 FGF18O76093 207 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 RECQL4O94761 1208 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 MYBP10242 640 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
APTX-220ENST00000476858 PROZP22891 400 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 TXLNAP40222 546 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 EFNA5P52803 228 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 BCAR1P56945 870 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ERVFC1P60507 584 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
APTX-220ENST00000476858 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 GLB1LQ6UWU2 654 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ABI1Q8IZP0 508 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 LRRC43Q8N309 656 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 ZSWIM2Q8NEG5 633 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 PAAF1Q9BRP4 392 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 PARVGQ9HBI0 331 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 HPSEQ9Y251 543 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 TNFSF13BQ9Y275 285 aa13.67□□□□□ -0.22
APTX-220ENST00000476858 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 HOXA2O43364 376 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
APTX-220ENST00000476858 PPP1R37O75864 691 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 GALTP07902 379 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 AFMP43652 599 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 NDUFA8P51970 172 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
APTX-220ENST00000476858 CUL4BQ13620 913 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
APTX-220ENST00000476858 NAB2Q15742 525 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 TCEAL5Q5H9L2 206 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 GLRA4Q5JXX5 417 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 POF1BQ8WVV4 589 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
APTX-220ENST00000476858 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
APTX-220ENST00000476858 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
APTX-220ENST00000476858 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 MARCH5Q9NX47 278 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 KCNH3Q9ULD8 1083 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 MYO7AQ13402 2215 aa13.66□□□□□ -0.22
APTX-220ENST00000476858 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
APTX-220ENST00000476858 INPPL1O15357 1258 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 RB1P06400 928 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 SKIP12755 728 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 IDEP14735 1019 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 HOXD13P35453 343 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 TNFSF9P41273 254 aa13.65□□□□□ -0.22
APTX-220ENST00000476858 TFF2Q03403 129 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms