RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 FSTL1Q12841 308 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 HLTFQ14527 1009 aaKnown RBP eCLIP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 UGCGQ16739 394 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 LRIG3Q6UXM1 1119 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 USP37Q86T82 979 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 NLRX1Q86UT6 975 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 NTPCRQ9BSD7 190 aaKnown RBP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 TMEM117Q9H0C3 514 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 DDX47Q9H0S4 455 aaKnown RBP17.75■□□□□ 0.43
TMEM53-208ENST00000476724 PCDHA10Q9Y5I2 948 aa17.75■□□□□ 0.43
TMEM53-208ENST00000476724 WDR81Q562E7 1941 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 MIF4GDA9UHW6 222 aaKnown RBP17.74■□□□□ 0.43
TMEM53-208ENST00000476724 TISP43B9A030 160 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 RTN2O75298 545 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 MFAP3P55082 362 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 ENPEPQ07075 957 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 DMP1Q13316 513 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-208ENST00000476724 TTMPQ5BVD1 217 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 EMC10Q5UCC4 262 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 C11orf63Q6NUN7 778 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 NCAPG2Q86XI2 1143 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 MAP4K3Q8IVH8 894 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 ARHGEF19Q8IW93 802 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 ANKRD35Q8N283 1001 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 MORC4Q8TE76 937 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 SPIRE2Q8WWL2 714 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 ARL8AQ96BM9 186 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 FAM114A2Q9NRY5 505 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 TBX20Q9UMR3 447 aa17.74■□□□□ 0.43
TMEM53-208ENST00000476724 CCNE2O96020 404 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 IRAK1P51617 712 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 GPC5P78333 572 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 PTPROQ16827 1216 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 TMEM161BQ8NDZ6 487 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 ARHGEF26Q96DR7 871 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 SLC10A4Q96EP9 437 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 MAF1Q9H063 256 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 PLEKHA4Q9H4M7 779 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 TAS2R14Q9NYV8 317 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 RBPJLQ9UBG7 517 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 COQ4Q9Y3A0 265 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 UTP11Q9Y3A2 253 aaKnown RBP17.73■□□□□ 0.43
TMEM53-208ENST00000476724 IGSF9BQ9UPX0 1349 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 GOLGA6L10A0A0M3HER8 536 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 TULP2O00295 520 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 FGGP02679 453 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 FTLP02792 175 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-208ENST00000476724 ECHS1P30084 290 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 ABCD1P33897 745 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
TMEM53-208ENST00000476724 Q3C1V9 767 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 KRT39Q6A163 491 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 TMC2Q8TDI7 906 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 TELO2Q9Y4R8 837 aa17.73■□□□□ 0.43
TMEM53-208ENST00000476724 ZNF233A6NK53 670 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 CCDC169A6NNP5 214 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 HSPA6P17066 643 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 CNGA1P29973 690 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 GTF2H1P32780 548 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 MKRN3Q13064 507 aaKnown RBP17.72■□□□□ 0.43
TMEM53-208ENST00000476724 MTMR3Q13615 1198 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 TRADDQ15628 312 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
TMEM53-208ENST00000476724 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
TMEM53-208ENST00000476724 PLEKHO2Q8TD55 490 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 ATP6V0A1Q93050 837 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 RPS6KC1Q96S38 1066 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 RAB17Q9H0T7 212 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 GPRC5CQ9NQ84 441 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 KMT5AQ9NQR1 393 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 AMACRQ9UHK6 382 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
TMEM53-208ENST00000476724 HMGB1P1B2RPK0 211 aaPredicted RBP17.71■□□□□ 0.43
TMEM53-208ENST00000476724 MTA2O94776 668 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 KRT14P02533 472 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 ITGA4P13612 1032 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 NPTX2P47972 431 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 PTENP60484 403 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 POU5F1Q01860 360 aaKnown RBP17.71■□□□□ 0.43
TMEM53-208ENST00000476724 ANO5Q75V66 913 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 PALB2Q86YC2 1186 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 UBL4BQ8N7F7 174 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 PARD3BQ8TEW8 1205 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 SLC20A1Q8WUM9 679 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
TMEM53-208ENST00000476724 FBXL18Q96ME1 805 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 TMEM8AQ9HCN3 771 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 CTTNBP2NLQ9P2B4 639 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 COG5Q9UP83 839 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 ALG6Q9Y672 507 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 ADRB2P07550 413 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 GPC3P51654 580 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 RTP1P59025 263 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 SNAPC2Q13487 334 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms