RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 POMGNT1Q8WZA1 660 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 KREMEN1Q96MU8 473 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 FAM204AQ9H8W3 233 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 CYP26B1Q9NR63 512 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 COG5Q9UP83 839 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 ERLIN2O94905 339 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 SGPL1O95470 568 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 MNAT1P51948 309 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 TRADDQ15628 312 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 KRT39Q6A163 491 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 RASGEF1CQ8N431 466 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 MCPH1Q8NEM0 835 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 CASKIN2Q8WXE0 1202 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 TOPORSQ9NS56 1045 aaPredicted RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 PEX10O60683 326 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 STAM2O75886 525 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
VARS2-207ENST00000476162 FAM153BP0C7A2 387 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FSTL1Q12841 308 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FAM153CQ494X1 144 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FAM71AQ8IYT1 594 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
VARS2-207ENST00000476162 ACP6Q9NPH0 428 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FAM153AQ9UHL3 310 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 KRIT1O00522 736 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 HNRNPDLO14979 420 aaKnown RBP17.23■□□□□ 0.35
VARS2-207ENST00000476162 PAK2Q13177 524 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 SUPT20HL1Q3ZLR7 823 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 CALR3Q96L12 384 aaKnown RBP17.23■□□□□ 0.35
VARS2-207ENST00000476162 MFSD14AQ96MC6 490 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 FBXL18Q96ME1 805 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 TMEM8AQ9HCN3 771 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
VARS2-207ENST00000476162 DOCK5Q9H7D0 1870 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 CYP26A1O43174 497 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 USP2O75604 605 aaPredicted RBP17.22■□□□□ 0.35
VARS2-207ENST00000476162 SUPT20HL2P0C7V6 817 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 ITGA4P13612 1032 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 MTERF2Q49AM1 385 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 KCNV1Q6PIU1 500 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 CYFIP1Q7L576 1253 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 TAS1R3Q7RTX0 852 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 NOP9Q86U38 636 aaKnown RBP17.22■□□□□ 0.35
VARS2-207ENST00000476162 EGFL6Q8IUX8 553 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 EPS8L1Q8TE68 723 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
VARS2-207ENST00000476162 PCDHB18PQ96TA0 734 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
VARS2-207ENST00000476162 ISCUQ9H1K1 167 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 WDR81Q562E7 1941 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 MYPNQ86TC9 1320 aa17.22■□□□□ 0.35
VARS2-207ENST00000476162 DDX3YO15523 660 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 SART1O43290 800 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 DLATP10515 647 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 CHRNB2P17787 502 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 MFAP3P55082 362 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 RTP1P59025 263 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 CYP24A1Q07973 514 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 NNTQ13423 1086 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 SLC47A2Q86VL8 602 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 TMC2Q8TDI7 906 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 DDX47Q9H0S4 455 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 NOCTQ9UK39 431 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 GPC3P51654 580 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 STXBP2Q15833 593 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
VARS2-207ENST00000476162 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 SV2AQ7L0J3 742 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 GPC2Q8N158 579 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 ANKRD35Q8N283 1001 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 FBXL13Q8NEE6 735 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 SHC3Q92529 594 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 FAM212AQ96EL1 285 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 BICD1Q96G01 975 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 RAB20Q9NX57 234 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 ARHGAP28Q9P2N2 729 aa17.21■□□□□ 0.35
VARS2-207ENST00000476162 ATP4AP20648 1035 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 ERVK-9P63128 1117 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 VGLL4Q14135 290 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 DCAF12L1Q5VU92 463 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 SEPT14Q6ZU15 432 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms