RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-208	ENST00000475716	EIF2A	Q9BY44	585 aa	Known RBP	11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	GLT8D2	Q9H1C3	349 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	PRMT8	Q9NR22	394 aa	Predicted RBP	11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	HEBP1	Q9NRV9	189 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	HCFC1R1	Q9NWW0	138 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	FNIP2	Q9P278	1114 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	CACNG4	Q9UBN1	327 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	HES2	Q9Y543	173 aa		11.19	□□□□□ -0.62
SNX5-208	ENST00000475716	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	CNTNAP2	Q9UHC6	1331 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	ADAM12	O43184	909 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	HR	O43593	1189 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	GAS7	O60861	476 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	C1R	P00736	705 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	MLH1	P40692	756 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	MAGEA9	P43362	315 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	RPS9	P46781	194 aa	Known RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	PFKP	Q01813	784 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	RTN1	Q16799	776 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	USP41	Q3LFD5	358 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	RTP2	Q5QGT7	225 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	PLA2G4F	Q68DD2	849 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	FUT10	Q6P4F1	479 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	APOA5	Q6Q788	366 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	PRR23B	Q6ZRT6	265 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	ANO5	Q75V66	913 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	MTSS1L	Q765P7	747 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	ZNF687	Q8N1G0	1237 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	PRPF31	Q8WWY3	499 aa	Known RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	SLC5A5	Q92911	643 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	TMEM143	Q96AN5	459 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	CCDC136	Q96JN2	1154 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	MBOAT7	Q96N66	472 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	CLSTN3	Q9BQT9	956 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	PHF20	Q9BVI0	1012 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	SEMA4G	Q9NTN9	838 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	RBM28	Q9NW13	759 aa	Known RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	NDRG2	Q9UN36	371 aa	Known RBP	11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	POLI	Q9UNA4	740 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	IPP	Q9Y573	584 aa		11.18	□□□□□ -0.62
SNX5-208	ENST00000475716	NCAM2	O15394	837 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	RET	P07949	1114 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	SFN	P31947	248 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ADD1	P35611	737 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	NPEPPS	P55786	919 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ADCY1	Q08828	1119 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	DMWD	Q09019	674 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	SRSF5	Q13243	272 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	PFKFB3	Q16875	520 aa	Predicted RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	LRCH2	Q5VUJ6	765 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	LAIR1	Q6GTX8	287 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	TANGO2	Q6ICL3	276 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ZNF852	Q6ZMS4	543 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	PRR23C	Q6ZRP0	262 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	MIER3	Q7Z3K6	550 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	CELF5	Q8N6W0	485 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	GSTCD	Q8NEC7	633 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ING5	Q8WYH8	240 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	MCRS1	Q96EZ8	462 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	RIT2	Q99578	217 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	APOL6	Q9BWW8	343 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	LSG1	Q9H089	658 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ZMYND12	Q9H0C1	365 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	DNMT3B	Q9UBC3	853 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ANGPTL2	Q9UKU9	493 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	RAB23	Q9ULC3	237 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	COL4A3BP	Q9Y5P4	624 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	ZFYVE26	Q68DK2	2539 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	SPEG	Q15772	3267 aa		11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	CNOT1	A5YKK6	2376 aa	Known RBP	11.17	□□□□□ -0.62
SNX5-208	ENST00000475716	MIA3	Q5JRA6	1907 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	hCG_1984214	I3L0E3	225 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	NRG2	O14511	850 aa	Predicted RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	ZBTB43	O43298	467 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	TADA2A	O75478	443 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	PSMD10	O75832	226 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	C8A	P07357	584 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	AKAP5	P24588	427 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	PML	P29590	882 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	HOXC13	P31276	330 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	JAK3	P52333	1124 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	CSRP2	Q16527	193 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	PPM1L	Q5SGD2	360 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	CREB3L3	Q68CJ9	461 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	NPAS3	Q8IXF0	933 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	REXO1	Q8N1G1	1221 aa	Known RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	ZNF713	Q8N859	430 aa	Predicted RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	LNX1	Q8TBB1	728 aa	Predicted RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	CPB2	Q96IY4	423 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	PAAF1	Q9BRP4	392 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	TEKT3	Q9BXF9	490 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	LMAN1L	Q9HAT1	526 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	C6orf50	Q9HD87	102 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	UBN1	Q9NPG3	1134 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	KLK14	Q9P0G3	267 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	FBXW11	Q9UKB1	542 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms