RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 FUCA2Q9BTY2 467 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 CCDC94Q9BW85 323 aaPredicted RBP4.78□□□□□ -1.64
RBM39-229ENST00000475651 LRRC2Q9BYS8 371 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 SEC61A2Q9H9S3 476 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 CD248Q9HCU0 757 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 CLDND1Q9NY35 253 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 FER1L4A9Z1Z3 1794 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 PALLDQ8WX93 1383 aa4.78□□□□□ -1.64
RBM39-229ENST00000475651 WDR19Q8NEZ3 1342 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 LMTK3Q96Q04 1460 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 CCDC196A0A1B0GTZ2 297 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 CCDC69A6NI79 296 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 AGRPO00253 132 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SPTLC2O15270 562 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 PPFIA2O75334 1257 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 TPM1P09493 284 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SLC5A1P13866 664 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 PDIA3P30101 505 aaKnown RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 MCM7P33993 719 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 LTBRP36941 435 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 RFX5P48382 616 aaPredicted RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 PIP4K2AP48426 406 aaPredicted RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 METAP2P50579 478 aaKnown RBP eCLIP4.77□□□□□ -1.65
RBM39-229ENST00000475651 CASP7P55210 303 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 RBM6P78332 1123 aaKnown RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SSRP1Q08945 709 aaKnown RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 TCIRG1Q13488 830 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 FHL2Q14192 279 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 ATP2B3Q16720 1220 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 INF2Q27J81 1249 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SV2CQ496J9 727 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SPDYAQ5MJ70 313 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 FAM173BQ6P4H8 233 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SARM1Q6SZW1 724 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 LDHAL6AQ6ZMR3 332 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 FILIP1Q7Z7B0 1213 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 Q8N1X5 172 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 Q8N1Y9 231 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 ZBTB38Q8NAP3 1195 aaPredicted RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 KIF18AQ8NI77 898 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 LMF1Q96S06 567 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SYT3Q9BQG1 590 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 KRT23Q9C075 422 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SMOC1Q9H4F8 434 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 TOMM22Q9NS69 142 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 CGNQ9P2M7 1197 aaKnown RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 MYOTQ9UBF9 498 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 APEX2Q9UBZ4 518 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 MED1Q15648 1581 aaPredicted RBP4.77□□□□□ -1.65
RBM39-229ENST00000475651 ABCC12Q96J65 1359 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 SLIT3O75094 1523 aa4.77□□□□□ -1.65
RBM39-229ENST00000475651 PXDNQ92626 1479 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 CYP27B1O15528 508 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 ZBTB43O43298 467 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 IDH1O75874 414 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SERPINC1P01008 464 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 A1BGP04217 495 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 PCCAP05165 728 aaPredicted RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SKILP12757 684 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 GNAT2P19087 354 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 CDK11BP21127 795 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SFPQP23246 707 aaKnown RBP eCLIP4.76□□□□□ -1.65
RBM39-229ENST00000475651 GTF2F1P35269 517 aaKnown RBP eCLIP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SYKP43405 635 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 HAND2P61296 217 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SYCP1Q15431 976 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 CDSNQ15517 529 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 EMC4Q5J8M3 183 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 ACBD5Q5T8D3 534 aaPredicted RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SLC9C2Q5TAH2 1124 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 ANO1Q5XXA6 986 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 TNS3Q68CZ2 1445 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 MBLAC2Q68D91 279 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 TMC5Q6UXY8 1006 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 RBM43Q6ZSC3 357 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 PLA2G4DQ86XP0 818 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 HOMER1Q86YM7 354 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 PPIL6Q8IXY8 311 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 TMTC2Q8N394 836 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 FBXL16Q8N461 479 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 NPLOC4Q8TAT6 608 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 FRS2Q8WU20 508 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 C16orf45Q96MC5 204 aaPredicted RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 SEC62Q99442 399 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 FEZ1Q99689 392 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 NAPBQ9H115 298 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 RNF41Q9H4P4 317 aaPredicted RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 DLL4Q9NR61 685 aa4.76□□□□□ -1.65
RBM39-229ENST00000475651 GNL3LQ9NVN8 582 aaKnown RBP4.76□□□□□ -1.65
RBM39-229ENST00000475651 ARGLU1Q9NWB6 273 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms