RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 CDCA2Q69YH5 1023 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 KIAA1841Q6NSI8 718 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 SPATA31D4Q6ZUB0 917 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 CABP7Q86V35 215 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 KREMEN2Q8NCW0 462 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 CCDC51Q96ER9 411 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 C8orf76Q96K31 380 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 RIPOR3Q96MK2 946 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 FAM193BQ96PV7 902 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 RPS6KC1Q96S38 1066 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 PAAF1Q9BRP4 392 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 LLPHQ9BRT6 129 aaKnown RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 APOL6Q9BWW8 343 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 KCNH6Q9H252 994 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 FOXP1Q9H334 677 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 RXFP1Q9HBX9 757 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 TUFT1Q9NNX1 390 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 UBN1Q9NPG3 1134 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 MRPL17Q9NRX2 175 aaKnown RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 GIT1Q9Y2X7 761 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 CARNS1A5YM72 827 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 PTGESO14684 152 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 RFPL2O75678 378 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 PAPLNO95428 1278 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 NPTXRO95502 500 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 OR52Z1P0C646 297 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 CYP11B2P19099 503 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 U2AF2P26368 475 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC3-207ENST00000475549 MTHFRP42898 656 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 MRE11P49959 708 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 BMS1Q14692 1282 aaKnown RBP7.78□□□□□ -1.16
HDAC3-207ENST00000475549 NAB2Q15742 525 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 FAM187BQ17R55 369 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 EEF1DP3Q658K8 133 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 SLC27A1Q6PCB7 646 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 LILRA6Q6PI73 481 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 PPFIBP1Q86W92 1011 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 NOSTRINQ8IVI9 506 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 ZDHHC14Q8IZN3 488 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 ZNF707Q96C28 371 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-207ENST00000475549 KIFC3Q9BVG8 833 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 HERC2P3Q9BVR0 1158 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 EMILIN2Q9BXX0 1053 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 CCDC113Q9H0I3 377 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 PDZD7Q9H5P4 517 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 DZANK1Q9NVP4 752 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 USTQ9Y2C2 406 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 NR2E1Q9Y466 385 aa7.78□□□□□ -1.16
HDAC3-207ENST00000475549 CCDC195A0A1B0GUA6 201 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 LRRIQ4A6NIV6 560 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 PP2D1A8MPX8 630 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 ACKR2O00590 384 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 RPL17P18621 184 aaKnown RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 CDC25AP30304 524 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 GLUD2P49448 558 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 RBM25P49756 843 aaKnown RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 FXR2P51116 673 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 NCBP1Q09161 790 aaKnown RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 MTMR3Q13615 1198 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 SAFBQ15424 915 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 RTP2Q5QGT7 225 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 TTC38Q5R3I4 469 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 NT5DC1Q5TFE4 455 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 PRSS55Q6UWB4 352 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 CD300LGQ6UXG3 332 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 PALB2Q86YC2 1186 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 MCPH1Q8NEM0 835 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 CMASQ8NFW8 434 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 MMTAG2Q9BU76 263 aaKnown RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 BHMT2Q9H2M3 363 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 SFXN1Q9H9B4 322 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 KCNK12Q9HB15 430 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 MAN1C1Q9NR34 630 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 SNTG2Q9NY99 539 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 STK39Q9UEW8 545 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 PARP2Q9UGN5 583 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 SORCS3Q9UPU3 1222 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 PCDHB6Q9Y5E3 794 aa7.77□□□□□ -1.17
HDAC3-207ENST00000475549 MYH9P35579 1960 aaKnown RBP7.77□□□□□ -1.17
HDAC3-207ENST00000475549 CASTOR2A6NHX0 329 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 E9PMD0 336 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 MEFVO15553 781 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ADAM12O43184 909 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 TGM5O43548 720 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PI15O43692 258 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 KIF4AO95239 1232 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 CD2BP2O95400 341 aaKnown RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 URODP06132 367 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ADH1AP07327 375 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 NPR3P17342 541 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 CCT6AP40227 531 aaKnown RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 TRAPPC10P48553 1259 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 GRIK3Q13003 919 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PTGDRQ13258 359 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms