RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 HDAC10Q969S8 669 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 CYFIP2Q96F07 1278 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 CDK5RAP1Q96SZ6 601 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 SENP6Q9GZR1 1112 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 IP6K2Q9UHH9 426 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 TCEAL9Q9UHQ7 104 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 ST6GALNAC2Q9UJ37 374 aa7.38□□□□□ -1.23
TM9SF3-204ENST00000475401 ACO1P21399 889 aaKnown RBP7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 SELENOPP49908 381 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 PPP3CAQ08209 521 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 MRPL49Q13405 166 aaKnown RBP7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 PIN1Q13526 163 aaPredicted RBP7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 SPATS1Q496A3 300 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 CPA6Q8N4T0 437 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 MDM1Q8TC05 714 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 MIEF2Q96C03 454 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 HSPBAP1Q96EW2 488 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 ADOQ96SZ5 270 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 LANCL2Q9NS86 450 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 TMEM140Q9NV12 185 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 TRPS1Q9UHF7 1281 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 TUBD1Q9UJT1 453 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 CLCA2Q9UQC9 943 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 ANKRD6Q9Y2G4 727 aa7.37□□□□□ -1.23
TM9SF3-204ENST00000475401 DTNBO60941 627 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 IL2RBP14784 551 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 WASP42768 502 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 PTH1RQ03431 593 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 ODF1Q14990 250 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 ZNF585AQ6P3V2 769 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 APBB1IPQ7Z5R6 666 aaPredicted RBP7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 FAM83AQ86UY5 434 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 RHOT1Q8IXI2 618 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 JDP2Q8WYK2 163 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 DPF2Q92785 391 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 BORCS6Q96GS4 357 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 MOCS1Q9NZB8 636 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 ZNF180Q9UJW8 692 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 SH3BP1Q9Y3L3 701 aa7.36□□□□□ -1.23
TM9SF3-204ENST00000475401 TEX33O43247 280 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 HIBADHP31937 336 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 MAGEA10P43363 369 aaPredicted RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 MCL1Q07820 350 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 PRKD1Q15139 912 aaPredicted RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 ATP2B3Q16720 1220 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 Q6ZVL8 140 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 CMTR2Q8IYT2 770 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 EDAQ92838 391 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 DVL3Q92997 716 aaPredicted RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 KLC2Q9H0B6 622 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 ENKD1Q9H0I2 346 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 METTL14Q9HCE5 456 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 TCF7L1Q9HCS4 588 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 CD248Q9HCU0 757 aa7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 HECAQ9UBI9 543 aaPredicted RBP7.35□□□□□ -1.23
TM9SF3-204ENST00000475401 PRR5-ARHGAP8B1AHC4 643 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 B5MCH6 92 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 MUSKO15146 869 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 FLT3LGP49771 235 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 RAB27AP51159 221 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 CRHR2Q13324 411 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 PRAMEF14Q5SWL7 426 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 PRRT2Q7Z6L0 340 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 RSPH3Q86UC2 560 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 ELOA2Q8IYF1 753 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 COA7Q96BR5 231 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 NUP88Q99567 741 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 PDCD2LQ9BRP1 358 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 TDP1Q9NUW8 608 aa7.34□□□□□ -1.23
TM9SF3-204ENST00000475401 CCDC154A6NI56 674 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 ADCY6O43306 1168 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 AKAP10O43572 662 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 STC2O76061 302 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 PF4V1P10720 104 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 ZSCAN20P17040 1043 aaPredicted RBP7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 SREBF1P36956 1147 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 SP140Q13342 867 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 FAM214AQ32MH5 1076 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 FAM47AQ5JRC9 791 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 TRMT2AQ8IZ69 625 aaKnown RBP7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 LILRA3Q8N6C8 439 aaPredicted RBP7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 MB21D1Q8N884 522 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 CCHCR1Q8TD31 782 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 HOXB13Q92826 284 aaPredicted RBP7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 ZMYM3Q14202 1370 aa7.33□□□□□ -1.24
TM9SF3-204ENST00000475401 GOLGA6L6A8MZA4 724 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 B8ZZF3 427 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 GPR32O75388 356 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 ABLIM3O94929 683 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 EFEMP1Q12805 493 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 SEPT2Q15019 361 aa7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 RRP12Q5JTH9 1297 aaKnown RBP7.32□□□□□ -1.24
TM9SF3-204ENST00000475401 DOK3Q7L591 496 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms