RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 MROH8Q9H579 483 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 VIPAS39Q9H9C1 493 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 NRBP2Q9NSY0 501 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 RAB20Q9NX57 234 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 MCM3APO60318 1980 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 ZNF233A6NK53 670 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 ADCY3O60266 1144 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CLSTN1O94985 981 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 LDHAP00338 332 aaKnown RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 EDN1P05305 212 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 GZMAP12544 262 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CHRNB2P17787 502 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 TCF7P36402 384 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 LIG4P49917 911 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 STAT5BP51692 787 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 MFAP3P55082 362 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 GCNT1Q02742 428 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 PRPF4BQ13523 1007 aaKnown RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 CAPSQ13938 189 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 RPS6KA1Q15418 735 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 Q3C1V9 767 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 ZACNQ401N2 412 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CELF3Q5SZQ8 465 aaKnown RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 SLFN12LQ6IEE8 588 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CCDC70Q6NSX1 233 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 ZPBP2Q6X784 338 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CCNI2Q6ZMN8 369 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 SV2AQ7L0J3 742 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 PLPPR4Q7Z2D5 763 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 DNAAF5Q86Y56 855 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 PALB2Q86YC2 1186 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 TAS1R2Q8TE23 839 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 SCFD2Q8WU76 684 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 SLC7A3Q8WY07 619 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 CTNNBL1Q8WYA6 563 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 ARHGEF26Q96DR7 871 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 HES6Q96HZ4 224 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 NT5C1BQ96P26 610 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 MMP19Q99542 508 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 GPR20Q99678 358 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 HAPLN2Q9GZV7 340 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 CCDC113Q9H0I3 377 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 RBM12Q9NTZ6 932 aaKnown RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 EHD2Q9NZN4 543 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
USP39-214ENST00000474572 SLC45A1Q9Y2W3 748 aa10.6□□□□□ -0.71
USP39-214ENST00000474572 ANK1P16157 1881 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 A0A0B4J269 797 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 GLTPD2A6NH11 291 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 DDX3YO15523 660 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 SORBS3O60504 671 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 RTN2O75298 545 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 SGPL1O95470 568 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 NOP2P46087 812 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 SLC26A2P50443 739 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 FMO1Q01740 532 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 STRN3Q13033 797 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 CASP8Q14790 479 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 IER5Q5VY09 327 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 C11orf63Q6NUN7 778 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 NOP9Q86U38 636 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 EXOC8Q8IYI6 725 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 RPUSD2Q8IZ73 545 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 SLC35G2Q8TBE7 412 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 ATP8B4Q8TF62 1192 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 AENQ8WTP8 325 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 DDX1Q92499 740 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 DHX38Q92620 1227 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 TAF4BQ92750 862 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 TMEM143Q96AN5 459 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 MS4A14Q96JA4 679 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 PSMB7Q99436 277 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 LRRC1Q9BTT6 524 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 TAF1DQ9H5J8 278 aaPredicted RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 TAS2R14Q9NYV8 317 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 SMARCAL1Q9NZC9 954 aa10.59□□□□□ -0.71
USP39-214ENST00000474572 DMGDHQ9UI17 866 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 PACSIN2Q9UNF0 486 aaPredicted RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
USP39-214ENST00000474572 CNTNAP2Q9UHC6 1331 aa10.58□□□□□ -0.71
USP39-214ENST00000474572 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 K7ERI5 159 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 BUB1BO60566 1050 aaPredicted RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 MYBL2P10244 700 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
USP39-214ENST00000474572 WNT7BP56706 349 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms