RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 ENPEPQ07075 957 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 MCL1Q07820 350 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 RBL2Q08999 1139 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 NCAPHQ15003 741 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 CD302Q8IX05 232 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 SEPT8Q92599 483 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 APBB2Q92870 758 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 RPF1Q9H9Y2 349 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 AGPAT5Q9NUQ2 364 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 DMAC2Q9NW81 257 aa11.27□□□□□ -0.61
COL12A1-206ENST00000474564 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-206ENST00000474564 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 IL18RAPO95256 599 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 TPM1P09493 284 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 GHRP10912 638 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 RAG1P15918 1043 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 AP3M2P53677 418 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 FANCCQ00597 558 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 FBXO47Q5MNV8 452 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 TAS1R3Q7RTX0 852 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 THNSL1Q8IYQ7 743 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 TMEM199Q8N511 208 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CCDC150Q8NCX0 1101 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 DIS3LQ8TF46 1054 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CPB2Q96IY4 423 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 TSPAN18Q96SJ8 248 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 LIMA1Q9UHB6 759 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
COL12A1-206ENST00000474564 ZMYM2Q9UBW7 1377 aa11.26□□□□□ -0.61
COL12A1-206ENST00000474564 GOLGA8IPA6NC78 632 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 LRRC10BA6NIK2 292 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 GOLGA8JA6NMD2 632 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 B4GALT5O43286 388 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 NPTXRO95502 500 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 IQCF3P0C7M6 154 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 VAMP7P51809 220 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 MGAT3Q09327 533 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 FAAP100Q0VG06 881 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 VWA3BQ502W6 1294 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 DCAF17Q5H9S7 520 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 SARM1Q6SZW1 724 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 LRRC55Q6ZSA7 311 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 ZC3H3Q8IXZ2 948 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 SAAL1Q96ER3 474 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 EEF2KMTQ96G04 330 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 VPS16Q9H269 839 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 PDZD7Q9H5P4 517 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-206ENST00000474564 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
COL12A1-206ENST00000474564 FRMPD3Q5JV73 1810 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 CCDC85CA6NKD9 419 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PHACTR2O75167 634 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 AKAP3O75969 853 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 AFPP02771 609 aaKnown RBP11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PFKMP08237 780 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ACTN1P12814 892 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ZNF18P17022 549 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 TNNI1P19237 187 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 FGFR4P22455 802 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 PROZP22891 400 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ADSSP30520 456 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 CD52P31358 61 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 GTF2H1P32780 548 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 GRM5P41594 1212 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 ACOT2P49753 483 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-206ENST00000474564 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
COL12A1-206ENST00000474564 UBXN1Q04323 297 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 BFSP1Q12934 665 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 LPIN1Q14693 890 aa11.24□□□□□ -0.61
COL12A1-206ENST00000474564 KRT31Q15323 416 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms