RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 IER5Q5VY09 327 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 TAS1R3Q7RTX0 852 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 IRF2BP1Q8IU81 584 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 RHPN2Q8IUC4 686 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 CCDC170Q8IYT3 715 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 CHP1Q99653 195 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 GUCA1BQ9UMX6 200 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 RRP15Q9Y3B9 282 aaKnown RBP22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 SIP14410 1827 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 GRIN2DO15399 1336 aa22.59■■□□□ 1.21
SMIM11A-204ENST00000474455 LRRIQ4A6NIV6 560 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 TISP43B9A030 160 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 VTNP04004 478 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 SRGAP2CP0DJJ0 459 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 RTP1P59025 263 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 LAMTOR4Q0VGL1 99 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 KNOP1Q1ED39 458 aaKnown RBP22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 NFRKBQ6P4R8 1299 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 RUFY4Q6ZNE9 571 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 CTU1Q7Z7A3 348 aaKnown RBP22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 RNF180Q86T96 592 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 IFT74Q96LB3 600 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 ZNHIT6Q9NWK9 470 aaKnown RBP22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 NRCAMQ92823 1304 aa22.58■■□□□ 1.21
SMIM11A-204ENST00000474455 TGFB1I1O43294 461 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 ZEB2O60315 1214 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 N4BP1O75113 896 aaKnown RBP22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 GTF2BQ00403 316 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 CDK17Q00537 523 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 BMT2Q1RMZ1 405 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 ZCWPW2Q504Y3 356 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 SPIRE2Q8WWL2 714 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 KATNAL1Q9BW62 490 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 C17orf75Q9HAS0 396 aa22.58■■□□□ 1.2
SMIM11A-204ENST00000474455 KIAA0100Q14667 2235 aaKnown RBP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 DENND3A2RUS2 1198 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 LRRIQ3A6PVS8 624 aaPredicted RBP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 EIF3DO15371 548 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 KPNA6O60684 536 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 MAPTP10636 758 aaKnown RBP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 CCL5P13501 91 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 SMTNP53814 917 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 CCDC122Q5T0U0 273 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 C7orf31Q8N865 590 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 PSPC1Q8WXF1 523 aaKnown RBP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 DEFB118Q96PH6 123 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 RNF208Q9H0X6 261 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 PAK6Q9NQU5 681 aaPredicted RBP22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 PCDHB13Q9Y5F0 798 aa22.57■■□□□ 1.2
SMIM11A-204ENST00000474455 RRN3P2A6NIE6 340 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 EIF3CLB5ME19 914 aaKnown RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 CLIC2O15247 247 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 MAGEB2O15479 319 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 MSCO60682 206 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 EDN1P05305 212 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 ACLYP53396 1101 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 TMEM62Q0P6H9 643 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 FAM114A1Q8IWE2 563 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 KIAA0319LQ8IZA0 1049 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 RNF149Q8NC42 400 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 TCP11Q8WWU5 503 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 NLRP4Q96MN2 994 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 EIF3CQ99613 913 aaKnown RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 ARHGAP28Q9P2N2 729 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 AKT3Q9Y243 479 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 CSDE1O75534 798 aaKnown RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 IPO7O95373 1038 aaKnown RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 NAMPTP43490 491 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 KIAA1328Q86T90 577 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 JAKMIP2Q96AA8 810 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 TSGA10Q9BZW7 698 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 FAM49AQ9H0Q0 323 aaPredicted RBP22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 TBX20Q9UMR3 447 aa22.56■■□□□ 1.2
SMIM11A-204ENST00000474455 C17orf102A2RUQ5 167 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 MBLAC1A4D2B0 266 aaPredicted RBP22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 GAS2O43903 313 aaKnown RBP22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 FAM47CQ5HY64 1035 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 FIGNQ5HY92 759 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 GDF6Q6KF10 455 aaPredicted RBP22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 WDR59Q6PJI9 974 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 EXOC8Q8IYI6 725 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 CSGALNACT2Q8N6G5 542 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 PCSK9Q8NBP7 692 aaKnown RBP22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 JPH2Q9BR39 696 aaPredicted RBP22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 ST6GALNAC4Q9H4F1 302 aa22.55■■□□□ 1.2
SMIM11A-204ENST00000474455 A0A1W2PQJ5 194 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 HOXC8P31273 242 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 ZBED6P86452 979 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 CCDC70Q6NSX1 233 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 VTI1AQ96AJ9 217 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 GTF2IRD1Q9UHL9 959 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 HPCAL4Q9UM19 191 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 BICDL2A1A5D9 508 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 TTLL13PA6NNM8 815 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 CYP2C9P11712 490 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 MXD4Q14582 209 aaPredicted RBP22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 DEPTORQ8TB45 409 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 COG1Q8WTW3 980 aa22.54■■□□□ 1.2
SMIM11A-204ENST00000474455 DNAJB3Q8WWF6 145 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms