RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 Q8NFD4 153 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OPTNQ96CV9 577 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SLC4A9Q96Q91 983 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 C9orf16Q9BUW7 83 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 API5Q9BZZ5 524 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 INTS2Q9H0H0 1204 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 GBA3Q9H227 469 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SLC39A2Q9NP94 309 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PRDM11Q9NQV5 511 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NRBP2Q9NSY0 501 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 INTS10Q9NVR2 710 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 GIT1Q9Y2X7 761 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FLT1P17948 1338 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OR6C74A6NCV1 312 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ACOD1A6NK06 481 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 B4DLN1 442 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 STX16-NPEPL1H3BU86 382 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TXNL1O43396 289 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PEX1O43933 1283 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OPN1MWP04001 364 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CYP1A1P04798 512 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 OPN1MW2P0DN77 364 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OPN1MW3P0DN78 364 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OSBPP22059 807 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 S100A1P23297 94 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TAGLN2P37802 199 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 PSMC4P43686 418 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ARSDP51689 593 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MLLT6P55198 1093 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 CARD18P57730 90 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SSTP61278 116 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PPARDQ03181 441 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ITKQ08881 620 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SMARCB1Q12824 385 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SNCBQ16143 134 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TCTE1Q5JU00 501 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TEX35Q5T0J7 233 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TBC1D9BQ66K14 1250 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 HEATR6Q6AI08 1181 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 TYW1BQ6NUM6 668 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 AAGABQ6PD74 315 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SLC51BQ86UW2 128 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TMTC1Q8IUR5 882 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SULF1Q8IWU6 871 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FAM186BQ8IYM0 893 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CCAR2Q8N163 923 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 MYCT1Q8N699 235 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CCDC155Q8N6L0 562 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 OR56B2PQ8NGI1 322 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DNAJB8Q8NHS0 232 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DIS3LQ8TF46 1054 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZUFSPQ96AP4 578 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NLRP4Q96MN2 994 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DACH2Q96NX9 599 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ACAT2Q9BWD1 397 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PITHD1Q9GZP4 211 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 NYXQ9GZU5 481 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SMOC1Q9H4F8 434 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 RAD21L1Q9H4I0 556 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SPTLC3Q9NUV7 552 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NMRK1Q9NWW6 199 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SLC39A1Q9NY26 324 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 RASAL2Q9UJF2 1139 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SCAF8Q9UPN6 1271 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 USP17L3A6NCW0 530 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 USP17L4A6NCW7 530 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 WDR46O15213 610 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 FZD6O60353 706 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SURF6O75683 361 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 SMNDC1O75940 238 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBR3-208ENST00000474426 TMCC1O94876 653 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SLITRK5O94991 958 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ECDO95905 644 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 PLGP00747 810 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 ALBP02768 609 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ENO2P09104 434 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 CLTBP09497 229 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 GSTT2P0CG29 244 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 GSTT2BP0CG30 244 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 ATP5F1P24539 256 aaPredicted RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 TTKP33981 857 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SOX11P35716 441 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 TRIM23P36406 574 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 HTR2BP41595 481 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 CD97P48960 835 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 GPX6P59796 221 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 NOP14P78316 857 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 CSTF3Q12996 717 aaKnown RBP3.74□□□□□ -1.81
UBR3-208ENST00000474426 BMPR2Q13873 1038 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 SPARCL1Q14515 664 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 TLR1Q15399 786 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 KMT5BQ4FZB7 885 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 C2orf27AQ580R0 203 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 KLHDC7AQ5VTJ3 777 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 USP17L2Q6R6M4 530 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 BEND4Q6ZU67 534 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 RAB11FIP2Q7L804 512 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 USP17L1Q7RTZ2 530 aa3.74□□□□□ -1.81
UBR3-208ENST00000474426 KRT73Q86Y46 540 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms