RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 ZNF568Q3ZCX4 644 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 DAW1Q8N136 415 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 VPS52Q8N1B4 723 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 SPIRE2Q8WWL2 714 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 RAD54LQ92698 747 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 USP28Q96RU2 1077 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 COLEC11Q9BWP8 271 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 RNF39Q9H2S5 420 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 ZHX3Q9H4I2 956 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
PFDN4-203ENST00000474326 ARHGAP28Q9P2N2 729 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 STK17AQ9UEE5 414 aa18.37■□□□□ 0.53
PFDN4-203ENST00000474326 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
PFDN4-203ENST00000474326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-203ENST00000474326 SFI1A8K8P3 1242 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 TNFRSF10AO00220 468 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 PER2O15055 1255 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 DDHD2O94830 711 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
PFDN4-203ENST00000474326 GRIN1Q05586 938 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 ADAM15Q13444 863 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 DUSP6Q16828 381 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 RRAGBQ5VZM2 374 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 CCDC73Q6ZRK6 1079 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 BICD1Q96G01 975 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 CCDC94Q9BW85 323 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-203ENST00000474326 PARVGQ9HBI0 331 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 KLK14Q9P0G3 267 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 CD207Q9UJ71 328 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 PRG3Q9Y2Y8 225 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-203ENST00000474326 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
PFDN4-203ENST00000474326 NRP1O14786 923 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 CXCL14O95715 111 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 DDIT3P35638 169 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 MAPK7Q13164 816 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 MCM6Q14566 821 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 CLUL1Q15846 466 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 SPECC1Q5M775 1068 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 MRPL43Q8N983 215 aaKnown RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 EPSTI1Q96J88 318 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 REEP2Q9BRK0 252 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 NTPCRQ9BSD7 190 aaKnown RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 GDAQ9Y2T3 454 aa18.35■□□□□ 0.53
PFDN4-203ENST00000474326 MORC2Q9Y6X9 1032 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-203ENST00000474326 TDRD15B5MCY1 1934 aaKnown RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 GRXCR2A6NFK2 248 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 SPTLC2O15270 562 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 LINC01565O15544 149 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 RECQL4O94761 1208 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 URODP06132 367 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 THP07101 528 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 CTSAP10619 480 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 STAT6P42226 847 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 AFF1P51825 1210 aaKnown RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 NT5DC1Q5TFE4 455 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 KIAA1841Q6NSI8 718 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 COLGALT2Q8IYK4 626 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 CLIC6Q96NY7 704 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 ACO2Q99798 780 aaKnown RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 EMILIN2Q9BXX0 1053 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 ZBP1Q9H171 429 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 MRPL17Q9NRX2 175 aaKnown RBP18.34■□□□□ 0.53
PFDN4-203ENST00000474326 CFAP45Q9UL16 551 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 REV3LO60673 3130 aa18.34■□□□□ 0.53
PFDN4-203ENST00000474326 NPHP3-ACAD11A0A0J9YXS1 232 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 C2orf71A6NGG8 1288 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 TTLL13PA6NNM8 815 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 K7ENM7 598 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 TBX10O75333 385 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 YEATS4O95619 227 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 F13A1P00488 732 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 MCF2P10911 925 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 DSC1Q08554 894 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 TUSC3Q13454 348 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 SMAD4Q13485 552 aaKnown RBP18.33■□□□□ 0.52
PFDN4-203ENST00000474326 BECN1Q14457 450 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 EEF1DP3Q658K8 133 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 MPZL3Q6UWV2 235 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 SV2BQ7L1I2 683 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 ZBTB33Q86T24 672 aa18.33■□□□□ 0.52
PFDN4-203ENST00000474326 PPFIBP1Q86W92 1011 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms