RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PRKAG3Q9UGI9 489 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 BARX2Q9UMQ3 279 aaPredicted RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 USP20Q9Y2K6 914 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 IRAK3Q9Y616 596 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 ATG2AQ2TAZ0 1938 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 SFI1A8K8P3 1242 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 NR1I2O75469 434 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 EDN1P05305 212 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 PLA2G4BP0C869 781 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 SRGAP2BP0DMP2 458 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 CTSAP10619 480 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 OR1G1P47890 313 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 SCNN1GP51170 649 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 DSC1Q08554 894 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 RESTQ13127 1097 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
CKS1B-206ENST00000474215 GIT2Q14161 759 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 TMEM119Q4V9L6 283 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 ZBP1Q9H171 429 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 KLK14Q9P0G3 267 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
CKS1B-206ENST00000474215 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 MUC3AQ02505 3323 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-206ENST00000474215 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
CKS1B-206ENST00000474215 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-206ENST00000474215 CA8P35219 290 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 GRIN1Q05586 938 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ZP2Q05996 745 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 RAD51AP2Q09MP3 1159 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 PTPAQ15257 358 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ATF7IP2Q5U623 682 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ANKRD54Q6NXT1 300 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 LLGL2Q6P1M3 1020 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ADHFE1Q8IWW8 467 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 AUTS2Q8WXX7 1259 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 COLEC11Q9BWP8 271 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 ARHGAP28Q9P2N2 729 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 MTMR6Q9Y217 621 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 TNFSF13BQ9Y275 285 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 PRG3Q9Y2Y8 225 aaPredicted RBP12.31□□□□□ -0.44
CKS1B-206ENST00000474215 PHLPP2Q6ZVD8 1323 aa12.31□□□□□ -0.44
CKS1B-206ENST00000474215 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 SLC16A4O15374 487 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 STX6O43752 255 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 PLS3P13797 630 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 HOXB8P17481 243 aaPredicted RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 SMTNP53814 917 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 GRIK3Q13003 919 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 ARSHQ5FYA8 562 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 CASP10Q92851 521 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
CKS1B-206ENST00000474215 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 USP15Q9Y4E8 981 aaPredicted RBP12.3□□□□□ -0.44
CKS1B-206ENST00000474215 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 LILRB3O75022 631 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 RECQL4O94761 1208 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 EFEMP2O95967 443 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 SOD2P04179 222 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 THP07101 528 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 PLCG1P19174 1290 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 CEBPZQ03701 1054 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 TUSC3Q13454 348 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 GPBP1Q86WP2 473 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 SLC22A17Q8WUG5 538 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 EPSTI1Q96J88 318 aa12.29□□□□□ -0.44
CKS1B-206ENST00000474215 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
CKS1B-206ENST00000474215 TARS2Q9BW92 718 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms