RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 COASYQ13057 564 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 LLGL2Q6P1M3 1020 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 FAM173BQ6P4H8 233 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 MRPL43Q8N983 215 aaKnown RBP19.77■□□□□ 0.76
UPF3A-203ENST00000474056 SYT2Q8N9I0 419 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-203ENST00000474056 SMRP1Q8NCR6 262 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 LRRC15Q8TF66 581 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 KHSRPQ92945 711 aaKnown RBP eCLIP19.77■□□□□ 0.769e-6■□□□□ 8.8
UPF3A-203ENST00000474056 DRC1Q96MC2 740 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 MARCH5Q9NX47 278 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 SNTG2Q9NY99 539 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 PRG3Q9Y2Y8 225 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-203ENST00000474056 PHLPP2Q6ZVD8 1323 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 PLXNA3P51805 1871 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 ZMYM2Q9UBW7 1377 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-203ENST00000474056 SFI1A8K8P3 1242 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 CXCL14O95715 111 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 ALDH2P05091 517 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 PLA2G4BP0C869 781 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 CTSAP10619 480 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 OR1G1P47890 313 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 SLC12A3P55017 1021 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 DMP1Q13316 513 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-203ENST00000474056 NT5DC1Q5TFE4 455 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 TAS1R3Q7RTX0 852 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 KCTD17Q8N5Z5 321 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 ADPGKQ9BRR6 497 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 ARHGAP28Q9P2N2 729 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
UPF3A-203ENST00000474056 PDCD11Q14690 1871 aaKnown RBP19.75■□□□□ 0.75
UPF3A-203ENST00000474056 F8W810 466 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 K7ERI5 159 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 CLASP2O75122 1294 aaKnown RBP19.75■□□□□ 0.75
UPF3A-203ENST00000474056 GUCY2CP25092 1073 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 LONP1P36776 959 aaKnown RBP19.75■□□□□ 0.75
UPF3A-203ENST00000474056 UBA7P41226 1012 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 ZP2Q05996 745 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 GRIK3Q13003 919 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 BMS1Q14692 1282 aaKnown RBP19.75■□□□□ 0.75
UPF3A-203ENST00000474056 PTPAQ15257 358 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 ATF7IP2Q5U623 682 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 GJD3Q8N144 294 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 SNX21Q969T3 373 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 RPS6KC1Q96S38 1066 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 TIPINQ9BVW5 301 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 KMT5AQ9NQR1 393 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 HCFC2Q9Y5Z7 792 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 IRAK3Q9Y616 596 aa19.75■□□□□ 0.75
UPF3A-203ENST00000474056 NPHP3-ACAD11A0A0J9YXS1 232 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 SLC26A4O43511 780 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 RECQL4O94761 1208 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 SSTR3P32745 418 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-203ENST00000474056 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-203ENST00000474056 KARSQ15046 597 aaKnown RBP19.74■□□□□ 0.75
UPF3A-203ENST00000474056 PTPN14Q15678 1187 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 DCAF4L1Q3SXM0 396 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 ANKRD54Q6NXT1 300 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 TMEM184AQ6ZMB5 413 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 ADHFE1Q8IWW8 467 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 CALML4Q96GE6 196 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 CXCL16Q9H2A7 254 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 TMEM134Q9H6X4 195 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 C17orf75Q9HAS0 396 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 BLOC1S4Q9NUP1 217 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 PRKAG3Q9UGI9 489 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 VWA8A3KMH1 1905 aa19.74■□□□□ 0.75
UPF3A-203ENST00000474056 MTCL1Q9Y4B5 1905 aaKnown RBP19.74■□□□□ 0.75
UPF3A-203ENST00000474056 SLC16A4O15374 487 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 STX6O43752 255 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 SRGAP2BP0DMP2 458 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 MARCKSP29966 332 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-203ENST00000474056 SYCE2Q6PIF2 218 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 HERC2P3Q9BVR0 1158 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 KCND2Q9NZV8 630 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 CACNG4Q9UBN1 327 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 GDAQ9Y2T3 454 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 USP15Q9Y4E8 981 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-203ENST00000474056 C2orf16Q68DN1 1984 aa19.73■□□□□ 0.75
UPF3A-203ENST00000474056 PTGESO14684 152 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 SOD2P04179 222 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 PLCG1P19174 1290 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 CEBPZQ03701 1054 aaKnown RBP19.72■□□□□ 0.75
UPF3A-203ENST00000474056 GIT2Q14161 759 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 DHX8Q14562 1220 aaKnown RBP19.72■□□□□ 0.75
UPF3A-203ENST00000474056 ARSHQ5FYA8 562 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 SPECC1Q5M775 1068 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 TAS1R1Q7RTX1 841 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 RNF168Q8IYW5 571 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-203ENST00000474056 CEP120Q8N960 986 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 RABGGTAQ92696 567 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 CASP10Q92851 521 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 ACO2Q99798 780 aaKnown RBP19.72■□□□□ 0.75
UPF3A-203ENST00000474056 APOL5Q9BWW9 433 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 EPHX3Q9H6B9 360 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 TNFSF13BQ9Y275 285 aa19.72■□□□□ 0.75
UPF3A-203ENST00000474056 C19orf67A6NJJ6 358 aa19.71■□□□□ 0.75
UPF3A-203ENST00000474056 EFEMP2O95967 443 aa19.71■□□□□ 0.75
UPF3A-203ENST00000474056 PLS3P13797 630 aa19.71■□□□□ 0.75
UPF3A-203ENST00000474056 MCM6Q14566 821 aa19.71■□□□□ 0.75
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