RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MLKLQ8NB16 471 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 KIAA0895Q8NCT3 520 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 DEPTORQ8TB45 409 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 ZNF507Q8TCN5 953 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 SCFD1Q8WVM8 642 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 DHX38Q92620 1227 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 TOX2Q96NM4 488 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 FDXACB1Q9BRP7 624 aaPredicted RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 FUCA2Q9BTY2 467 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CELF4Q9BZC1 486 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 ST6GALNAC4Q9H4F1 302 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 IFT122Q9HBG6 1241 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 ANO10Q9NW15 660 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 TBX20Q9UMR3 447 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 GINS2Q9Y248 185 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 ATP11BQ9Y2G3 1177 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 PCDHB11Q9Y5F2 797 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 TCHHQ07283 1943 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 MROH7Q68CQ1 1323 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 MYH15Q9Y2K3 1946 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 H0YCG3 227 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 K7ENM7 598 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 EIF3DO15371 548 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 TLR3O15455 904 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 DKK1O94907 266 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 RPLP2P05387 115 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 IQCF3P0C7M6 154 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 CKBP12277 381 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 HOXD13P35453 343 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 PHKA2P46019 1235 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 EFNA5P52803 228 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 CRYBB1P53674 252 aaPredicted RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ZNF445P59923 1031 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 MRPS6P82932 125 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 DPCR1Q3MIW9 517 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 COBLL1Q53SF7 1204 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 L1TD1Q5T7N2 865 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 CDCA2Q69YH5 1023 aaPredicted RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 LRSAM1Q6UWE0 723 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ZNF410Q86VK4 478 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ZBTB8OSQ8IWT0 167 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 NELFCDQ8IXH7 590 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ADSSL1Q8N142 457 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 GUF1Q8N442 669 aaKnown RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 SCLT1Q96NL6 688 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ACCSQ96QU6 501 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 GCOM2Q9BZD3 368 aaPredicted RBP8.33□□□□□ -1.08
CCDC93-207ENST00000474006 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 FZD8Q9H461 694 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 MINDY3Q9H8M7 445 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ARHGAP28Q9P2N2 729 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 USP20Q9Y2K6 914 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 CDY2AQ9Y6F7 541 aa8.33□□□□□ -1.08
CCDC93-207ENST00000474006 ADGRA3Q8IWK6 1321 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 RBAK-RBAKDNI3L0D1 243 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 INO80B-WBP1J3KQ70 363 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 M0QZ92 97 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 ACKR2O00590 384 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 CAND2O75155 1236 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 KIF20AO95235 890 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 CTSHP09668 335 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 SCP2P22307 547 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 FGFR4P22455 802 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 EIF4BP23588 611 aaKnown RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 MBTD1Q05BQ5 628 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 MGAT3Q09327 533 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 STRN3Q13033 797 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 BFSP2Q13515 415 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 STIM1Q13586 685 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 ALCAMQ13740 583 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 STX1AQ16623 288 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 MAPK6Q16659 721 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 ANO6Q4KMQ2 910 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 CT47A1Q5JQC4 288 aaPredicted RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 KLHL10Q6JEL2 608 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 STXBP4Q6ZWJ1 553 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 EHBP1Q8NDI1 1231 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 KCNN1Q92952 543 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 OSMRQ99650 979 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 INO80BQ9C086 356 aaPredicted RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 CCDC113Q9H0I3 377 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms