RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PIGRP01833 764 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 GAP43P17677 238 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 AKAP5P24588 427 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 APBB1IPQ7Z5R6 666 aaPredicted RBP19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 ZNF280BQ86YH2 543 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 FAM178BQ8IXR5 827 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 URGCPQ8TCY9 931 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 ZNF558Q96NG5 402 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 C7orf25Q9BPX7 421 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 MAGEF1Q9HAY2 307 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 ALG13Q9NP73 1137 aaKnown RBP19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 LZTS1Q9Y250 596 aa19.42■□□□□ 0.7
RPUSD3-214ENST00000473522 FGF18O76093 207 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 DDHD2O94830 711 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 GALTP07902 379 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 MCF2P10911 925 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 DNAJB1P25685 340 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 ALDH7A1P49419 539 aaKnown RBP19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 BCAR1P56945 870 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 TMEM132AQ24JP5 1023 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 SLC39A11Q8N1S5 342 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 ZHX3Q9H4I2 956 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 OLFML3Q9NRN5 406 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 SNTG2Q9NY99 539 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 INPP5FQ9Y2H2 1132 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 COL6A3P12111 3177 aa19.41■□□□□ 0.7
RPUSD3-214ENST00000473522 PPP1R37O75864 691 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 POMCP01189 267 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 ALDH2P05091 517 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 SLFN14P0C7P3 912 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 NMT1P30419 496 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 PPM1AP35813 382 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 MLH1P40692 756 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 GRM5P41594 1212 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 DSC1Q08554 894 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 MPZL3Q6UWV2 235 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 POF1BQ8WVV4 589 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 STAMQ92783 540 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 ZBTB45Q96K62 511 aaPredicted RBP19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 TMEM175Q9BSA9 504 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 CDT1Q9H211 546 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 PANK4Q9NVE7 773 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 PARP2Q9UGN5 583 aa19.4■□□□□ 0.7
RPUSD3-214ENST00000473522 A0A1B0GVL5 298 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 B4GALT3O60512 393 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 PFKFB1P16118 471 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 KRT17Q04695 432 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 MCL1Q07820 350 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 XKR4Q5GH76 650 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 HERC4Q5GLZ8 1057 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 ALKAL1Q6UXT8 129 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 SFR1Q86XK3 245 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 MAP4K3Q8IVH8 894 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 COLGALT2Q8IYK4 626 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 THNSL1Q8IYQ7 743 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 MRPS27Q92552 414 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 TCHPQ9BT92 498 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 APOL6Q9BWW8 343 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 DNAJB4Q9UDY4 337 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 USP25Q9UHP3 1055 aa19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 PUF60Q9UHX1 559 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-214ENST00000473522 K7ENM7 598 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 CLDN3O15551 220 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 IDEP14735 1019 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 ANP32AP39687 249 aaKnown RBP19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 SCNN1GP51170 649 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 ZC2HC1CQ53FD0 456 aaPredicted RBP19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 LOXHD1Q8IVV2 1947 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 CCDC65Q8IXS2 484 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 HVCN1Q96D96 273 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 IGSF21Q96ID5 467 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 GDPD2Q9HCC8 539 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 KLK14Q9P0G3 267 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 PCDHB13Q9Y5F0 798 aa19.38■□□□□ 0.69
RPUSD3-214ENST00000473522 GBF1Q92538 1859 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 ACTN4O43707 911 aaKnown RBP19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 RECQL4O94761 1208 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 PBX3P40426 434 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 SLC11A1P49279 550 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 ZNF568Q3ZCX4 644 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 TIGD5Q53EQ6 642 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 PDE12Q6L8Q7 609 aaKnown RBP19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 FAM193BQ96PV7 902 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 HAPLN2Q9GZV7 340 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 MRPL44Q9H9J2 332 aaKnown RBP19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 SERTAD1Q9UHV2 236 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 STYXL1Q9Y6J8 313 aa19.37■□□□□ 0.69
RPUSD3-214ENST00000473522 A0A0B4J269 797 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 PVALEFA0A1B0GWK0 134 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 NT5C1B-RDH14C9J2C7 533 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 PTGESO14684 152 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 NRP1O14786 923 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 FSCN2O14926 492 aa19.36■□□□□ 0.69
RPUSD3-214ENST00000473522 NDUFA8P51970 172 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms