RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 GPT2Q8TD30 523 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 SP7Q8TDD2 431 aaPredicted RBP20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 SCFD1Q8WVM8 642 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 YME1L1Q96TA2 773 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 TCHPQ9BT92 498 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 PBX4Q9BYU1 374 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 CLSTN2Q9H4D0 955 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 RNF19AQ9NV58 838 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 ANKFY1Q9P2R3 1169 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 MSRAQ9UJ68 235 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 CITO14578 2027 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 NLRC5Q86WI3 1866 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 TDRD15B5MCY1 1934 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 KIF20AO95235 890 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 PTMSP20962 102 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 RABGGTBP53611 331 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 SNRPFP62306 86 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 SLC39A4Q6P5W5 647 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 AGMOQ6ZNB7 445 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 CMTR2Q8IYT2 770 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 SYCP3Q8IZU3 236 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 RNF169Q8NCN4 708 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 ZBTB45Q96K62 511 aaPredicted RBP20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 TMEM117Q9H0C3 514 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 NXF3Q9H4D5 531 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 RSAD1Q9HA92 442 aa20.77■□□□□ 0.92
CTDSP1-207ENST00000473420 KIAA1671Q9BY89 1806 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 ANKRD63C9JTQ0 380 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 FGFR1P11362 822 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 IBSPP21815 317 aaPredicted RBP20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 GRM5P41594 1212 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 MATR3P43243 847 aaKnown RBP eCLIP20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 KYAT1Q16773 422 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 HABP4Q5JVS0 413 aaKnown RBP20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 CLLU1OSQ5K130 101 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 ABI1Q8IZP0 508 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 LPPQ93052 612 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 GBP3Q9H0R5 595 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 GIT1Q9Y2X7 761 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 HES2Q9Y543 173 aa20.76■□□□□ 0.91
CTDSP1-207ENST00000473420 A0A0B4J269 797 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 INPPL1O15357 1258 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 GARTP22102 1010 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 DNAJB2P25686 324 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 HOXD13P35453 343 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 COBLL1Q53SF7 1204 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 ZNF658Q5TYW1 1059 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 GLB1LQ6UWU2 654 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 ZBTB33Q86T24 672 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 ERCC4Q92889 916 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 CASD1Q96PB1 797 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 CCDC94Q9BW85 323 aaPredicted RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 MRPL9Q9BYD2 267 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 HAPLN2Q9GZV7 340 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 NUP62CLQ9H1M0 184 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 CGNQ9P2M7 1197 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 YBX2Q9Y2T7 364 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
CTDSP1-207ENST00000473420 TRIP11Q15643 1979 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 TMEM265A0A087WTH1 108 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 MEIS3P2A8K0S8 358 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 KIAA0391O15091 583 aaKnown RBP20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 OGTO15294 1046 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 OFD1O75665 1012 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 PBX2P40425 430 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 CAMK4Q16566 473 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 KNOP1Q1ED39 458 aaKnown RBP20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 GUF1Q8N442 669 aaKnown RBP20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 MSTO1Q9BUK6 570 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 SNTG2Q9NY99 539 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 KIAA1468Q9P260 1216 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 GDAQ9Y2T3 454 aa20.74■□□□□ 0.91
CTDSP1-207ENST00000473420 TBKBP1A7MCY6 615 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 FAM189A1O60320 539 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 CA3P07451 260 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 ADSSP30520 456 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 GATMP50440 423 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 BTG3Q14201 252 aaPredicted RBP20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 NELFCDQ8IXH7 590 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 THNSL1Q8IYQ7 743 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 LRRC43Q8N309 656 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 CEP120Q8N960 986 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 TRIML1Q8N9V2 468 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 POMGNT1Q8WZA1 660 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 APOL6Q9BWW8 343 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 IKZF4Q9H2S9 585 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 TOPORSQ9NS56 1045 aaPredicted RBP20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 KANSL3Q9P2N6 904 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 PARP2Q9UGN5 583 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 MAN1B1Q9UKM7 699 aa20.73■□□□□ 0.91
CTDSP1-207ENST00000473420 LCHNA4D1U4 455 aa20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 TISP43B9A030 160 aa20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 SOX1O00570 391 aaPredicted RBP20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 TGFB1I1O43294 461 aa20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 RECQL4O94761 1208 aa20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 LDHAP00338 332 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-207ENST00000473420 CLTAP09496 248 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms