RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FAM180AQ6UWF9 173 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 Q6ZSN1 163 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 TRMT2AQ8IZ69 625 aaKnown RBP7.47□□□□□ -1.21
CLK1-209ENST00000472679 PQLC1Q8N2U9 271 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 ARL8AQ96BM9 186 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 IL17RAQ96F46 866 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 LOXL4Q96JB6 756 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 PDCD2LQ9BRP1 358 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 CDH19Q9H159 772 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 BCO1Q9HAY6 547 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 ST6GALNAC2Q9UJ37 374 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 GIT1Q9Y2X7 761 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 PCDHA13Q9Y5I0 950 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 K7ESM1 405 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
CLK1-209ENST00000472679 ZNF623O75123 536 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 GASTP01350 101 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 GZMKP49863 264 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 SLC16A1P53985 500 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 IL10RAQ13651 578 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 MFSD14BQ5SR56 506 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 MIER2Q8N344 545 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 STON2Q8WXE9 905 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 RAB24Q969Q5 203 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 CEP95Q96GE4 821 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 ZNF512Q96ME7 567 aaPredicted RBP7.46□□□□□ -1.22
CLK1-209ENST00000472679 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.22
CLK1-209ENST00000472679 HECAQ9UBI9 543 aaPredicted RBP7.46□□□□□ -1.22
CLK1-209ENST00000472679 ANKRD6Q9Y2G4 727 aa7.46□□□□□ -1.22
CLK1-209ENST00000472679 E2F8A0AVK6 867 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 PTPN7P35236 360 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 FXR1P51114 621 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLK1-209ENST00000472679 PER3P56645 1201 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 APBA1Q02410 837 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 FKBP15Q5T1M5 1219 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 POLNQ7Z5Q5 900 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 TPH2Q8IWU9 490 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 D2HGDHQ8N465 521 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 KAT5Q92993 513 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 UHRF1Q96T88 793 aaPredicted RBP7.45□□□□□ -1.22
CLK1-209ENST00000472679 C7orf25Q9BPX7 421 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 SAP30BPQ9UHR5 308 aaKnown RBP7.45□□□□□ -1.22
CLK1-209ENST00000472679 JAG2Q9Y219 1238 aa7.45□□□□□ -1.22
CLK1-209ENST00000472679 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 ENDOD1O94919 500 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 SCGB1D2O95969 90 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 AMY1AP04745 511 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 SYN1P17600 705 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 SPTY2D1Q68D10 685 aaPredicted RBP7.44□□□□□ -1.22
CLK1-209ENST00000472679 CATIPQ7Z7H3 387 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 XYLT1Q86Y38 959 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 RHOT1Q8IXI2 618 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 ELOA2Q8IYF1 753 aaPredicted RBP7.44□□□□□ -1.22
CLK1-209ENST00000472679 ZNF808Q8N4W9 903 aaPredicted RBP7.44□□□□□ -1.22
CLK1-209ENST00000472679 ZGPATQ8N5A5 531 aaKnown RBP7.44□□□□□ -1.22
CLK1-209ENST00000472679 CCHCR1Q8TD31 782 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 SAMD11Q96NU1 681 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 CSRNP2Q9H175 543 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 EPC1Q9H2F5 836 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 ATRNL1Q5VV63 1379 aa7.44□□□□□ -1.22
CLK1-209ENST00000472679 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 ACO1P21399 889 aaKnown RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 FPR1P21462 350 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 COMTP21964 271 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 GUCY1A2P33402 732 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 PPP2R5AQ15172 486 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 ELAVL1Q15717 326 aaKnown RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 ANKS6Q68DC2 871 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 ZNF585AQ6P3V2 769 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 HDAC10Q969S8 669 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 BORCS6Q96GS4 357 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 CAMKK2Q96RR4 588 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 LSM14BQ9BX40 385 aaKnown RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 KCNH6Q9H252 994 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 LANCL2Q9NS86 450 aa7.43□□□□□ -1.22
CLK1-209ENST00000472679 AJAP1Q9UKB5 411 aaPredicted RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 NOB1Q9ULX3 412 aaKnown RBP7.43□□□□□ -1.22
CLK1-209ENST00000472679 PRPF3O43395 683 aaKnown RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 POU2F2P09086 479 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 PDCP20941 246 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 PCSK1P29120 753 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 TARDBPQ13148 414 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLK1-209ENST00000472679 GJC2Q5T442 439 aaPredicted RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 MAMDC4Q6UXC1 1216 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 MIGA2Q7L4E1 593 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 ZNF572Q7Z3I7 529 aaPredicted RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 SLC35B2Q8TB61 432 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 TSR2Q969E8 191 aaKnown RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 MPHOSPH9Q99550 1183 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 GTPBP4Q9BZE4 634 aaKnown RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 METTL14Q9HCE5 456 aaKnown RBP7.42□□□□□ -1.22
CLK1-209ENST00000472679 PCDHB1Q9Y5F3 818 aa7.42□□□□□ -1.22
CLK1-209ENST00000472679 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
CLK1-209ENST00000472679 RFPL1O75677 317 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms