RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 CEP290O15078 2479 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 MEIS3P2A8K0S8 358 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 SOX1O00570 391 aaPredicted RBP13.49□□□□□ -0.25
PRKCB-205ENST00000472066 HOXA2O43364 376 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 HOXD13P35453 343 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 GATMP50440 423 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 MCL1Q07820 350 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 CAMK4Q16566 473 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 ZNF568Q3ZCX4 644 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 CLLU1OSQ5K130 101 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 SLC39A4Q6P5W5 647 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 HACE1Q8IYU2 909 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 SYCP3Q8IZU3 236 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 RC3H2Q9HBD1 1191 aaKnown RBP13.49□□□□□ -0.25
PRKCB-205ENST00000472066 UBN1Q9NPG3 1134 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 ANKFY1Q9P2R3 1169 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
PRKCB-205ENST00000472066 A0A0B4J269 797 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 TBKBP1A7MCY6 615 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 TISP43B9A030 160 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 OFD1O75665 1012 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 AKAP5P24588 427 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 DNAJB2P25686 324 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 GRM5P41594 1212 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKCB-205ENST00000472066 BMT2Q1RMZ1 405 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 SLFN12LQ6IEE8 588 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
PRKCB-205ENST00000472066 HELQQ8TDG4 1101 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 APOL6Q9BWW8 343 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 NKX2-4Q9H2Z4 354 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 CLSTN2Q9H4D0 955 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 SNTG2Q9NY99 539 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
PRKCB-205ENST00000472066 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 UBE4BO95155 1302 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 CA3P07451 260 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 ADSSP30520 456 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 NOLC1Q14978 699 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 GLB1LQ6UWU2 654 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 CMTR2Q8IYT2 770 aaKnown RBP13.47□□□□□ -0.25
PRKCB-205ENST00000472066 CEP120Q8N960 986 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 KIAA1468Q9P260 1216 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 MAN1B1Q9UKM7 699 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 GIT1Q9Y2X7 761 aa13.47□□□□□ -0.25
PRKCB-205ENST00000472066 ZMYM2Q9UBW7 1377 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 OGTO15294 1046 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 ARHGEF15O94989 841 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 MBD3O95983 291 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 OSTNP61366 133 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 SNRPFP62306 86 aaKnown RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 SEZ6Q53EL9 994 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 NOMO2Q5JPE7 1267 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 ISM2Q6H9L7 571 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 TMEM192Q8IY95 271 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 RSPH1Q8WYR4 309 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 LRCH3Q96II8 777 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 ACAP3Q96P50 834 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 GAD1Q99259 594 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 GTPBP4Q9BZE4 634 aaKnown RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 GBP3Q9H0R5 595 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 SLC28A3Q9HAS3 691 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 TYW1Q9NV66 732 aaKnown RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 KLK14Q9P0G3 267 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
PRKCB-205ENST00000472066 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 INPP5FQ9Y2H2 1132 aa13.46□□□□□ -0.25
PRKCB-205ENST00000472066 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 INPPL1O15357 1258 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 FAM189A1O60320 539 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 RECQL4O94761 1208 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 KIF20AO95235 890 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 CLTAP09496 248 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 GARTP22102 1010 aa13.45□□□□□ -0.26
PRKCB-205ENST00000472066 MLH1P40692 756 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms