RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 C2orf40Q9H1Z8 148 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 KCNH6Q9H252 994 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 FZD8Q9H461 694 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 PARP2Q9UGN5 583 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 SPDYE4A6NLX3 237 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 C2CD4DB7Z1M9 353 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 MUTP22033 750 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 U2AF2P26368 475 aaKnown RBP eCLIP24.93■■□□□ 1.583e-8■□□□□ 10.3
C9orf3-213ENST00000471978 CCT6AP40227 531 aaKnown RBP24.93■■□□□ 1.58
C9orf3-213ENST00000471978 FXR2P51116 673 aaKnown RBP eCLIP24.93■■□□□ 1.58
C9orf3-213ENST00000471978 FAM187BQ17R55 369 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 TMC5Q6UXY8 1006 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 GSTCDQ8NEC7 633 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 BSNDQ8WZ55 320 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 RPS6KC1Q96S38 1066 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 COLEC11Q9BWP8 271 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 SFXN1Q9H9B4 322 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 KLK14Q9P0G3 267 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 LRWD1Q9UFC0 647 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 SSX2IPQ9Y2D8 614 aa24.93■■□□□ 1.58
C9orf3-213ENST00000471978 F8W810 466 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 EFEMP2O95967 443 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 HOXD11P31277 338 aaPredicted RBP24.92■■□□□ 1.58
C9orf3-213ENST00000471978 ECM1Q16610 540 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 TMEM132AQ24JP5 1023 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 ZNF318Q5VUA4 2279 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 ZMYM2Q9UBW7 1377 aa24.92■■□□□ 1.58
C9orf3-213ENST00000471978 TDRD15B5MCY1 1934 aaKnown RBP24.91■■□□□ 1.58
C9orf3-213ENST00000471978 TTLL13PA6NNM8 815 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 GLUD2P49448 558 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 TOB1P50616 345 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-213ENST00000471978 GRIK3Q13003 919 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 PRPF4BQ13523 1007 aaKnown RBP24.91■■□□□ 1.58
C9orf3-213ENST00000471978 MAPK6Q16659 721 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 RNF168Q8IYW5 571 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-213ENST00000471978 DEPTORQ8TB45 409 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 PDZD7Q9H5P4 517 aa24.91■■□□□ 1.58
C9orf3-213ENST00000471978 N4BP3O15049 544 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 PRKCBP05771 671 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 ADH1AP07327 375 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 LIG1P18858 919 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 NAMPTP43490 491 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 PTGDRQ13258 359 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 PDIA5Q14554 519 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 KIAA0319Q5VV43 1072 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 GPR149Q86SP6 731 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 SUGP1Q8IWZ8 645 aaKnown RBP24.9■■□□□ 1.58
C9orf3-213ENST00000471978 KREMEN2Q8NCW0 462 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 FEZF2Q8TBJ5 459 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 BHMT2Q9H2M3 363 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 POLD4Q9HCU8 107 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 KIAA1024Q9UPX6 916 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 PCDHB6Q9Y5E3 794 aa24.9■■□□□ 1.58
C9orf3-213ENST00000471978 TEX28O15482 410 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 DSG1Q02413 1049 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 PPP2R5AQ15172 486 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 RABEP1Q15276 862 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 TDRD5Q8NAT2 981 aaKnown RBP24.89■■□□□ 1.58
C9orf3-213ENST00000471978 ASIC4Q96FT7 647 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 IFT74Q96LB3 600 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 RAB34Q9BZG1 259 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 CCDC113Q9H0I3 377 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 USP20Q9Y2K6 914 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 STK24Q9Y6E0 443 aa24.89■■□□□ 1.58
C9orf3-213ENST00000471978 ACKR2O00590 384 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 MTMR3Q13615 1198 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 FUT10Q6P4F1 479 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 ZDHHC14Q8IZN3 488 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 FBXL6Q8N531 539 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 IGSF22Q8N9C0 903 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 SNX29Q8TEQ0 813 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 RABGGTAQ92696 567 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 ADPGKQ9BRR6 497 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 GPR62Q9BZJ7 368 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 RXFP1Q9HBX9 757 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 MAN1C1Q9NR34 630 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 CHST7Q9NS84 486 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 DDX19AQ9NUU7 478 aaKnown RBP24.88■■□□□ 1.57
C9orf3-213ENST00000471978 SNTG2Q9NY99 539 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 ADAM28Q9UKQ2 775 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 SORCS3Q9UPU3 1222 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 USTQ9Y2C2 406 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 PIEZO1Q92508 2521 aa24.88■■□□□ 1.57
C9orf3-213ENST00000471978 PLCD3Q8N3E9 789 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 KIFAP3Q92845 792 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 B3GALT6Q96L58 329 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 KIFC3Q9BVG8 833 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 LIMD1Q9UGP4 676 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 KIF3AQ9Y496 699 aa24.87■■□□□ 1.57
C9orf3-213ENST00000471978 ZDBF2Q9HCK1 2354 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 ST18O60284 1047 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 TADA2AO75478 443 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 GLUD1P00367 558 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 EDN1P05305 212 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 EFNA5P52803 228 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 NHLH1Q02575 133 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 TUSC3Q13454 348 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 USP41Q3LFD5 358 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 ELMSAN1Q6PJG2 1045 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 C15orf39Q6ZRI6 1047 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms