RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 SSBP3Q9BWW4 388 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-208ENST00000471910 HDAC5Q9UQL6 1122 aa6.12□□□□□ -1.43
CDHR3-208ENST00000471910 PATE3B3GLJ2 98 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 GNAT2P19087 354 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 COMTP21964 271 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 FOXL1Q12952 345 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 MRPL49Q13405 166 aaKnown RBP6.11□□□□□ -1.43
CDHR3-208ENST00000471910 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 LILRA6Q6PI73 481 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 ANKRD35Q8N283 1001 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 DPF2Q92785 391 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 BORCS6Q96GS4 357 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 ZNF512Q96ME7 567 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-208ENST00000471910 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-208ENST00000471910 SENP6Q9GZR1 1112 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-208ENST00000471910 LANCL2Q9NS86 450 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 TMEM140Q9NV12 185 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 ZIM2Q9NZV7 527 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 TRPS1Q9UHF7 1281 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 PNMA8BQ9ULN7 279 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-208ENST00000471910 TCAF1Q9Y4C2 921 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 EID1Q9Y6B2 187 aa6.11□□□□□ -1.43
CDHR3-208ENST00000471910 HOXA3O43365 443 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 DTNBO60941 627 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 IPO13O94829 963 aaKnown RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 ABLIM3O94929 683 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 U2AF1L5P0DN76 240 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 PF4V1P10720 104 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 IL2RBP14784 551 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 AKAP5P24588 427 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 U2AF1Q01081 240 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 PTH1RQ03431 593 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 Q6ZVL8 140 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 FAM83AQ86UY5 434 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 RHOT1Q8IXI2 618 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 GSPT2Q8IYD1 628 aaKnown RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 TTC9BQ8N6N2 239 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 MDM1Q8TC05 714 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 Q8TCH9 128 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 JPH3Q8WXH2 748 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 ENKD1Q9H0I2 346 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 MOCS1Q9NZB8 636 aa6.1□□□□□ -1.43
CDHR3-208ENST00000471910 THRAP3Q9Y2W1 955 aaKnown RBP6.1□□□□□ -1.43
CDHR3-208ENST00000471910 CCDC154A6NI56 674 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CYP27B1O15528 508 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 HTRA2O43464 458 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-208ENST00000471910 RFPL1O75677 317 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CYP2C19P33261 490 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 SREBF1P36956 1147 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 ELAVL1Q15717 326 aaKnown RBP6.09□□□□□ -1.43
CDHR3-208ENST00000471910 FAM47AQ5JRC9 791 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 APBB1IPQ7Z5R6 666 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-208ENST00000471910 RSPH3Q86UC2 560 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CHPFQ8IZ52 775 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 DNERQ8NFT8 737 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CDH19Q9H159 772 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 TDP1Q9NUW8 608 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 HECAQ9UBI9 543 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CLCA2Q9UQC9 943 aa6.09□□□□□ -1.43
CDHR3-208ENST00000471910 CAPN14A8MX76 684 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 TEX33O43247 280 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ZRANB2O95218 330 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 FLT3LGP49771 235 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 SP140Q13342 867 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ICAM4Q14773 271 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 SEPT2Q15019 361 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 NFE2Q16621 373 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ATP2B3Q16720 1220 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 PRAMEF14Q5SWL7 426 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 TRMT2AQ8IZ69 625 aaKnown RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 LILRA3Q8N6C8 439 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 CCHCR1Q8TD31 782 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ST8SIA2Q92186 375 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 HOXB13Q92826 284 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 MIEF2Q96C03 454 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 CPPED1Q9BRF8 314 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 RHOBTB2Q9BYZ6 727 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 SMPD4Q9NXE4 827 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ST6GALNAC2Q9UJ37 374 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 LIMCH1Q9UPQ0 1083 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
CDHR3-208ENST00000471910 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
CDHR3-208ENST00000471910 ZMYM3Q14202 1370 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 BTBD11A6QL63 1104 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 PRR5-ARHGAP8B1AHC4 643 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 B5MCH6 92 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 ADCY6O43306 1168 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 PDCP20941 246 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 ACO1P21399 889 aaKnown RBP6.07□□□□□ -1.44
CDHR3-208ENST00000471910 RRP12Q5JTH9 1297 aaKnown RBP6.07□□□□□ -1.44
CDHR3-208ENST00000471910 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
CDHR3-208ENST00000471910 TTC7BQ86TV6 843 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 REPS2Q8NFH8 660 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 OR2I1PQ8NGU4 316 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 CASKIN2Q8WXE0 1202 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 EDAQ92838 391 aa6.07□□□□□ -1.44
CDHR3-208ENST00000471910 CDK5RAP1Q96SZ6 601 aaKnown RBP6.07□□□□□ -1.44
CDHR3-208ENST00000471910 PDCD2LQ9BRP1 358 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms