RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 PALB2Q86YC2 1186 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 KSR1Q8IVT5 923 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 RNF149Q8NC42 400 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 PRPF31Q8WWY3 499 aaKnown RBP12.61□□□□□ -0.39
MRPL40-203ENST00000471259 BRF1Q92994 677 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 ZNF707Q96C28 371 aaPredicted RBP12.61□□□□□ -0.39
MRPL40-203ENST00000471259 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
MRPL40-203ENST00000471259 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
MRPL40-203ENST00000471259 VPS54Q9P1Q0 977 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 ADAM28Q9UKQ2 775 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 CDH7Q9ULB5 785 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 PCDHA4Q9UN74 947 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 IPPQ9Y573 584 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 NUMBLQ9Y6R0 609 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 SF3B1O75533 1304 aaKnown RBP eCLIP12.61□□□□□ -0.39
MRPL40-203ENST00000471259 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
MRPL40-203ENST00000471259 TADA2AO75478 443 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 STBD1O95210 358 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 XBP1P17861 261 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 HOXA11P31270 313 aaPredicted RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 MLH1P40692 756 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 GRIK3Q13003 919 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 PPP2R5CQ13362 524 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 FUT10Q6P4F1 479 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 KRT25Q7Z3Z0 450 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 SUMF1Q8NBK3 374 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 GAD1Q99259 594 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 MTRQ99707 1265 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 SH2D3AQ9BRG2 576 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 MARCH5Q9NX47 278 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
MRPL40-203ENST00000471259 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
MRPL40-203ENST00000471259 DCHS1Q96JQ0 3298 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 INO80B-WBP1J3KQ70 363 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 CPLX1O14810 134 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 TBX3O15119 743 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 TBC1D4O60343 1298 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 B4GALT3O60512 393 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 DEXIO95424 95 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 SCNN1GP51170 649 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 NRLP54845 237 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
MRPL40-203ENST00000471259 UBXN2BQ14CS0 331 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 UVSSAQ2YD98 709 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 PPP4R3AQ6IN85 833 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 LILRA6Q6PI73 481 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 ETNPPLQ8TBG4 499 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 TMEM143Q96AN5 459 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 RTKNQ9BST9 563 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 ZSWIM4Q9H7M6 989 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 ZSCAN32Q9NX65 697 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
MRPL40-203ENST00000471259 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.39
MRPL40-203ENST00000471259 MIA3Q5JRA6 1907 aa12.58□□□□□ -0.39
MRPL40-203ENST00000471259 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.39
MRPL40-203ENST00000471259 TMEM150BA6NC51 233 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 FAM170BA6NMN3 283 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 TDP2O95551 362 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 EFEMP2O95967 443 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 POU2F2P09086 479 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 SPATA31D3P0C874 917 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 PTENP60484 403 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 GPC5P78333 572 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 EMC2Q15006 297 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 EPHA7Q15375 998 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 XKR9Q5GH70 373 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 SPATA31D4Q6ZUB0 917 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 IFNLR1Q8IU57 520 aaPredicted RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 DAGLBQ8NCG7 672 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.4
MRPL40-203ENST00000471259 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
MRPL40-203ENST00000471259 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms