RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 GOLPH3LQ9H4A5 285 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PCSK1NQ9UHG2 260 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 BLOC1S6Q9UL45 172 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ENO3P13929 434 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SLC16A2P36021 539 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SYCP2LQ5T4T6 812 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 DDI2Q5TDH0 399 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 P3H2Q8IVL5 708 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 APLFQ8IW19 511 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 LEMD2Q8NC56 503 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 RASGRP4Q8TDF6 673 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 DCAF5Q96JK2 942 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 L3MBTL3Q96JM7 780 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ETNK1Q9HBU6 452 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 CYP26B1Q9NR63 512 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 KRT84Q9NSB2 600 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ARAP3Q8WWN8 1544 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 P4HA2O15460 535 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 HUS1O60921 280 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 GDF11O95390 407 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 IRF1P10914 325 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 CPB1P15086 417 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 HSD3B2P26439 372 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SOX6P35712 828 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PDIA2Q13087 525 aaKnown RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 NKX1-1Q15270 411 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 MAN2A1Q16706 1144 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM16LQ309B1 348 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF667Q5HYK9 610 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 RSBN1Q5VWQ0 802 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ITPRIPL1Q6GPH6 555 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 NEK10Q6ZWH5 1172 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 TAF8Q7Z7C8 310 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 DENND6AQ8IWF6 608 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 OTUD7AQ8TE49 926 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SH3TC2Q8TF17 1288 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL25Q9H0H3 589 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 C10orf88Q9H8K7 445 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 CD274Q9NZQ7 290 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ANAPC7Q9UJX3 599 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SH3GLB1Q9Y371 365 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 N6AMT1Q9Y5N5 214 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 LRRC9Q6ZRR7 1453 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 NSD2O96028 1365 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 E2F8A0AVK6 867 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 STRNO43815 780 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 CDC27P30260 824 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 ST8SIA6P61647 398 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 TMC5Q6UXY8 1006 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 MARCH10Q8NA82 808 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 EME1Q96AY2 570 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 STAMBPL1Q96FJ0 436 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 METTL22Q9BUU2 404 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PARD6BQ9BYG5 372 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 OSBPL6Q9BZF3 934 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 C20orf96Q9NUD7 363 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-210ENST00000471181 PCDHGA4Q9Y5G9 962 aa7.27□□□□□ -1.25
BRCA1-210ENST00000471181 TYK2P29597 1187 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RABGAP1LQ5R372 815 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SCFD1Q8WVM8 642 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RBM41Q96IZ5 413 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 MBD2Q9UBB5 411 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TNKSO95271 1327 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SKAP2O75563 359 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 USP14P54578 494 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 MAGOHP61326 146 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CDC16Q13042 620 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CTTNQ14247 550 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RCN1Q15293 331 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GALNT17Q6IS24 598 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 OOSP2Q86WS3 158 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 MIER2Q8N344 545 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GLMNQ92990 594 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RNF25Q96BH1 459 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 OLFM1Q99784 485 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 APOL5Q9BWW9 433 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SERHL2Q9H4I8 314 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SERHLQ9NQF3 203 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GGT7Q9UJ14 662 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PYCARDQ9ULZ3 195 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ANKRD36BQ8N2N9 1353 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 LRRIQ3A6PVS8 624 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PDZK1P1A8MUH7 402 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 E9PBE3 544 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 F8W810 466 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CCDC22O60826 627 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ALDH1A2O94788 518 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 MFN2O95140 757 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM49P0CI25 452 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM49CP0CI26 452 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 BRAFP15056 766 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 EIF2S3P41091 472 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ZSWIM7Q19AV6 140 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 NAALADL2Q58DX5 795 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms