RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 RAX2Q96IS3 184 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 K7ESF4 209 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 RPS6KA4O75676 772 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 IPO13O94829 963 aaKnown RBP6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 GYPEP15421 78 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 MTNR1BP49286 362 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 APBA1Q02410 837 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 IQSEC1Q6DN90 963 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 MRGPREQ86SM8 312 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 DDX42Q86XP3 938 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 SLC35B2Q8TB61 432 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF483Q8TF39 744 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 CLIP3Q96DZ5 547 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 RPTORQ8N122 1335 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
PRPF40A-206ENST00000471167 PEX11BO96011 259 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 APOBEC3AP31941 199 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 ABHD18Q0P651 414 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 FHL2Q14192 279 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 INAVAQ3KP66 663 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 CT47A1Q5JQC4 288 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF662Q6ZS27 426 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 FAM83AQ86UY5 434 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 LDLRAD3Q86YD5 345 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 AMER2Q8N7J2 671 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 OR2I1PQ8NGU4 316 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 AHCYL2Q96HN2 611 aaKnown RBP6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 IFT122Q9HBG6 1241 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 CHST2Q9Y4C5 530 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
PRPF40A-206ENST00000471167 GOLGA6L6A8MZA4 724 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 ADSLP30566 484 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 SEPT2Q15019 361 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 SPATS2Q86XZ4 545 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 TRMT2AQ8IZ69 625 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 GPR156Q8NFN8 814 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 AUTS2Q8WXX7 1259 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 NEU1Q99519 415 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 NDC1Q9BTX1 674 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 SORCS3Q9UPU3 1222 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 SIK3Q9Y2K2 1263 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 PRKAB1Q9Y478 270 aa6.92□□□□□ -1.3
PRPF40A-206ENST00000471167 TBKBP1A7MCY6 615 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 SLC6A9P48067 706 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 RPUSD2Q8IZ73 545 aaKnown RBP6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 SLC2A13Q96QE2 648 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 IKZF4Q9H2S9 585 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF185O15231 689 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 GASTP01350 101 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 OSMP13725 252 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 CNGA1P29973 690 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 MCM7P33993 719 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 CRHR1P34998 444 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 SREBF1P36956 1147 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 HMGA2P52926 109 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 BMT2Q1RMZ1 405 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 RNF219Q5W0B1 726 aaPredicted RBP6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF276Q8N554 614 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 CPT1CQ8TCG5 803 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 SLC25A43Q8WUT9 341 aaPredicted RBP6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF480Q8WV37 535 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 LENG9Q96B70 501 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 EPC1Q9H2F5 836 aa6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 ZNF277Q9NRM2 450 aaPredicted RBP6.9□□□□□ -1.3
PRPF40A-206ENST00000471167 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.31
PRPF40A-206ENST00000471167 AKR1B10O60218 316 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 ZSCAN20P17040 1043 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 MCAMP43121 646 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 USP51Q70EK9 711 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 ZNF572Q7Z3I7 529 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 ULK2Q8IYT8 1036 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 RNF169Q8NCN4 708 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 OR7D4Q8NG98 312 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 FATE1Q969F0 183 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 CDC5LQ99459 802 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 GREM2Q9H772 168 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 NRDE2Q9H7Z3 1164 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 DNAJC28Q9NX36 388 aa6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 REXO2Q9Y3B8 237 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-206ENST00000471167 CXorf49A8MYA2 514 aaPredicted RBP6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 AMPD3Q01432 767 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 COL10A1Q03692 680 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 DPTQ07507 201 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 FAM102AQ5T9C2 384 aaPredicted RBP6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 ATL2Q8NHH9 583 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 CHFRQ96EP1 664 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
PRPF40A-206ENST00000471167 ATP8A1Q9Y2Q0 1164 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms