RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZFP42Q96MM3 310 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 KIFC3Q9BVG8 833 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 C17orf75Q9HAS0 396 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 POLD4Q9HCU8 107 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 MIOSQ9NXC5 875 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 STK39Q9UEW8 545 aa15.52■□□□□ 0.08
COMMD3-208ENST00000470045 PHLPP2Q6ZVD8 1323 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 NRP1O14786 923 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 HIP1RO75146 1068 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 NPTX2P47972 431 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 RESTQ13127 1097 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 SF3A1Q15459 793 aaKnown RBP15.51■□□□□ 0.07
COMMD3-208ENST00000470045 ADHFE1Q8IWW8 467 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 RNF168Q8IYW5 571 aaPredicted RBP15.51■□□□□ 0.07
COMMD3-208ENST00000470045 SYT2Q8N9I0 419 aaPredicted RBP15.51■□□□□ 0.07
COMMD3-208ENST00000470045 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 APOL6Q9BWW8 343 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 MARCH5Q9NX47 278 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 ARHGAP28Q9P2N2 729 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 C5orf42Q9H799 3197 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 TRIP11Q15643 1979 aa15.51■□□□□ 0.07
COMMD3-208ENST00000470045 ALDH2P05091 517 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 AKAP5P24588 427 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 PEX3P56589 373 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 GRIK3Q13003 919 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 GIT2Q14161 759 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 PTPAQ15257 358 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 NT5DC1Q5TFE4 455 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 EEF1DP3Q658K8 133 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 CABP7Q86V35 215 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 GJD3Q8N144 294 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 LRRC15Q8TF66 581 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.071e-11■■□□□ 14
COMMD3-208ENST00000470045 SNX21Q969T3 373 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 FAM193BQ96PV7 902 aaPredicted RBP15.5■□□□□ 0.07
COMMD3-208ENST00000470045 TMEM134Q9H6X4 195 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 KCND2Q9NZV8 630 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 USP20Q9Y2K6 914 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 HCFC2Q9Y5Z7 792 aa15.5■□□□□ 0.07
COMMD3-208ENST00000470045 CLASP2O75122 1294 aaKnown RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 SRGAP2BP0DMP2 458 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 LONP1P36776 959 aaKnown RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 GRIN1Q05586 938 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 DMP1Q13316 513 aaPredicted RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 BMS1Q14692 1282 aaKnown RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 PTPN14Q15678 1187 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 ANKRD54Q6NXT1 300 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 TAS1R3Q7RTX0 852 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 SUSD6Q92537 303 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 NTPCRQ9BSD7 190 aaKnown RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 MTMR6Q9Y217 621 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 TNFSF13BQ9Y275 285 aa15.49■□□□□ 0.07
COMMD3-208ENST00000470045 USP15Q9Y4E8 981 aaPredicted RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 MORC2Q9Y6X9 1032 aaPredicted RBP15.49■□□□□ 0.07
COMMD3-208ENST00000470045 PDCD11Q14690 1871 aaKnown RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 K7ERI5 159 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PTGESO14684 152 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 LILRB3O75022 631 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 RECQL4O94761 1208 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 CXCL14O95715 111 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 ATF7IP2Q5U623 682 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 SYCE2Q6PIF2 218 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 SPIRE2Q8WWL2 714 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 CASP10Q92851 521 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 KCNN1Q92952 543 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PLIN2Q99541 437 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 POP1Q99575 1024 aaKnown RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 HERC2P3Q9BVR0 1158 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 S1PR5Q9H228 398 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PTPRHQ9HD43 1115 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 KLK14Q9P0G3 267 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PARP2Q9UGN5 583 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PRG3Q9Y2Y8 225 aaPredicted RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
COMMD3-208ENST00000470045 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 CLIC4Q9Y696 253 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 PLXNA3P51805 1871 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 DENND4AQ7Z401 1863 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 CITO14578 2027 aa15.48■□□□□ 0.07
COMMD3-208ENST00000470045 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 SOD2P04179 222 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 PLS3P13797 630 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 HOXB8P17481 243 aaPredicted RBP15.47■□□□□ 0.07
COMMD3-208ENST00000470045 LIG1P18858 919 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 UBA7P41226 1012 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 OR1G1P47890 313 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 NAB2Q15742 525 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 TMEM132AQ24JP5 1023 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms