RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 IGSF21Q96ID5 467 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 ADAMTS10Q9H324 1103 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 JPH1Q9HDC5 661 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-209ENST00000469511 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 ARHGEF3Q9NR81 526 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 KCNH7Q9NS40 1196 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 DZANK1Q9NVP4 752 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 SPATA6Q9NWH7 488 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-209ENST00000469511 SMG5Q9UPR3 1016 aaKnown RBP6.02□□□□□ -1.45
PTPN4-209ENST00000469511 HRH3Q9Y5N1 445 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 IRAK3Q9Y616 596 aa6.02□□□□□ -1.45
PTPN4-209ENST00000469511 FRYQ5TBA9 3013 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 GREB1Q4ZG55 1949 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 EML5Q05BV3 1969 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 IGKV6D-21A0A0A0MT36 114 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 F8W810 466 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 C2CD2LO14523 706 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ADAMTS3O15072 1205 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 INPPL1O15357 1258 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PRMT3O60678 531 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 LILRB5O75023 590 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PLEKHA8P1O95397 391 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 LAMP2P13473 410 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 RXRAP19793 462 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 KLRC2P26717 231 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PPM1AP35813 382 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 STARD6P59095 220 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 NTHL1P78549 312 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 CBLBQ13191 982 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 CLN3Q13286 438 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 DRP2Q13474 957 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 HTR4Q13639 388 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 CCDC178Q5BJE1 867 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 N4BP2L1Q5TBK1 243 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ZC3H14Q6PJT7 736 aaKnown RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PARM1Q6UWI2 310 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 CWC27Q6UX04 472 aaKnown RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ABHD15Q6UXT9 468 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 TAS1R3Q7RTX0 852 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PLPPR4Q7Z2D5 763 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 RAB11FIP4Q86YS3 637 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ABI1Q8IZP0 508 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 LRRC71Q8N4P6 559 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 METTL13Q8N6R0 699 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ZBTB44Q8NCP5 570 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 GIMAP8Q8ND71 665 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 NELL1Q92832 810 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 HPS1Q92902 700 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 FGF14Q92915 247 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 MXRA8Q9BRK3 442 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ESYT1Q9BSJ8 1104 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 UBAC1Q9BSL1 405 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 RTKNQ9BST9 563 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 GBP3Q9H0R5 595 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 AZI2Q9H6S1 392 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 ZFAND3Q9H8U3 227 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 SFXN1Q9H9B4 322 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 WDR6Q9NNW5 1121 aaKnown RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 MAN1C1Q9NR34 630 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 SH2B1Q9NRF2 756 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 TBC1D13Q9NVG8 400 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 EPS15L1Q9UBC2 864 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PCDHA6Q9UN73 950 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 PCDHA8Q9Y5H6 950 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 NUMBLQ9Y6R0 609 aa6.01□□□□□ -1.45
PTPN4-209ENST00000469511 SETXQ7Z333 2677 aaKnown RBP6.01□□□□□ -1.45
PTPN4-209ENST00000469511 CLUHO75153 1309 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 PDCD11Q14690 1871 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 VWA8A3KMH1 1905 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 TICRRQ7Z2Z1 1910 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 A0A0U1RQF3 1178 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 A0A1W2PRU2 124 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 FAM170BA6NMN3 283 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 PRR5-ARHGAP8B1AHC4 643 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 ANHXE9PGG2 379 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 DHX15O43143 795 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 HBP1O60381 514 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 IL2RAP01589 272 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 PTGIRP43119 386 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 ALDH7A1P49419 539 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 SMTNP53814 917 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 ANTXR2P58335 489 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 ARHGAP8P85298 464 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 SRSF5Q13243 272 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 UBXN2BQ14CS0 331 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 SWSAP1Q6NVH7 229 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 GET4Q7L5D6 327 aaPredicted RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 GLYCTKQ8IVS8 523 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 SRBD1Q8N5C6 995 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 MEIOBQ8N635 442 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 LINC01465Q8N7H1 131 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 B3GALT6Q96L58 329 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 DDX23Q9BUQ8 820 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 EPC1Q9H2F5 836 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 AGO4Q9HCK5 861 aaKnown RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 RXFP3Q9NSD7 469 aa6□□□□□ -1.45
PTPN4-209ENST00000469511 SCHIP1Q9P0W5 487 aaPredicted RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 INPP5FQ9Y2H2 1132 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms