RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PARP2Q9UGN5 583 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 IRAK3Q9Y616 596 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 CCDC169A6NNP5 214 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 K7ERI5 159 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 GUCY2CP25092 1073 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 SSTR3P32745 418 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-204ENST00000469443 CA8P35219 290 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 NPTX2P47972 431 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 PEX3P56589 373 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 ZP2Q05996 745 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 MAPK7Q13164 816 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 GIT2Q14161 759 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 SF3A1Q15459 793 aaKnown RBP20.14■□□□□ 0.81
PHGDH-204ENST00000469443 TMEM119Q4V9L6 283 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 ADHFE1Q8IWW8 467 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 SYT2Q8N9I0 419 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-204ENST00000469443 GSTCDQ8NEC7 633 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 VN1R3Q9BXE9 311 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 C17orf75Q9HAS0 396 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 USP20Q9Y2K6 914 aa20.14■□□□□ 0.81
PHGDH-204ENST00000469443 PHLPP2Q6ZVD8 1323 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-204ENST00000469443 CLASP2O75122 1294 aaKnown RBP20.13■□□□□ 0.81
PHGDH-204ENST00000469443 SSBP05455 408 aaKnown RBP eCLIP20.13■□□□□ 0.81
PHGDH-204ENST00000469443 UBA7P41226 1012 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 OR1G1P47890 313 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 GRIK3Q13003 919 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 DMP1Q13316 513 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-204ENST00000469443 EEF1DP3Q658K8 133 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 LLGL2Q6P1M3 1020 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 CASP10Q92851 521 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 CALML4Q96GE6 196 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 RPS6KC1Q96S38 1066 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 KLK14Q9P0G3 267 aa20.13■□□□□ 0.81
PHGDH-204ENST00000469443 PRG3Q9Y2Y8 225 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-204ENST00000469443 MTCL1Q9Y4B5 1905 aaKnown RBP20.12■□□□□ 0.81
PHGDH-204ENST00000469443 C19orf67A6NJJ6 358 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 NR1I2O75469 434 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 PLA2G4BP0C869 781 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 LONP1P36776 959 aaKnown RBP20.12■□□□□ 0.81
PHGDH-204ENST00000469443 SLC12A3P55017 1021 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 RESTQ13127 1097 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 DCAF4L1Q3SXM0 396 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 NT5DC1Q5TFE4 455 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 ATF7IP2Q5U623 682 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 ANKRD54Q6NXT1 300 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 TMEM87AQ8NBN3 555 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 POP1Q99575 1024 aaKnown RBP20.12■□□□□ 0.81
PHGDH-204ENST00000469443 TMEM134Q9H6X4 195 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 KMT5AQ9NQR1 393 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 MARCH5Q9NX47 278 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 SNTG2Q9NY99 539 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 KCND2Q9NZV8 630 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 ARHGAP28Q9P2N2 729 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
PHGDH-204ENST00000469443 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-204ENST00000469443 GTF3C3Q9Y5Q9 886 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
PHGDH-204ENST00000469443 PLXNA3P51805 1871 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 PDCD11Q14690 1871 aaKnown RBP20.11■□□□□ 0.81
PHGDH-204ENST00000469443 GRIN1Q05586 938 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 RAD51AP2Q09MP3 1159 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 PTPN14Q15678 1187 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 SYCE2Q6PIF2 218 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 APBB1IPQ7Z5R6 666 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-204ENST00000469443 KHSRPQ92945 711 aaKnown RBP eCLIP20.11■□□□□ 0.81
PHGDH-204ENST00000469443 SNX21Q969T3 373 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
PHGDH-204ENST00000469443 SFI1A8K8P3 1242 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 RECQL4O94761 1208 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 SOD2P04179 222 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 HOXB8P17481 243 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-204ENST00000469443 PTPAQ15257 358 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 NTPCRQ9BSD7 190 aaKnown RBP20.1■□□□□ 0.81
PHGDH-204ENST00000469443 HERC2P3Q9BVR0 1158 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 COLEC11Q9BWP8 271 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 KCNG1Q9UIX4 513 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 MTMR6Q9Y217 621 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 TNFSF13BQ9Y275 285 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 CLIC4Q9Y696 253 aa20.1■□□□□ 0.81
PHGDH-204ENST00000469443 EFEMP2O95967 443 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 PLS3P13797 630 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 TAS1R3Q7RTX0 852 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 RNF168Q8IYW5 571 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-204ENST00000469443 SPIRE2Q8WWL2 714 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 SUSD6Q92537 303 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 ACO2Q99798 780 aaKnown RBP20.09■□□□□ 0.81
PHGDH-204ENST00000469443 MRPL4Q9BYD3 311 aaKnown RBP20.09■□□□□ 0.81
PHGDH-204ENST00000469443 S1PR5Q9H228 398 aa20.09■□□□□ 0.81
PHGDH-204ENST00000469443 MRPL17Q9NRX2 175 aaKnown RBP20.09■□□□□ 0.81
PHGDH-204ENST00000469443 F8W810 466 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 PTGESO14684 152 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 SLC16A4O15374 487 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 STX6O43752 255 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 LILRB3O75022 631 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 URODP06132 367 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 PLCG1P19174 1290 aa20.08■□□□□ 0.81
PHGDH-204ENST00000469443 TUSC3Q13454 348 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms