RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CFAP54Q96N23 3096 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
COL5A1-207ENST00000469093 NR1I2O75469 434 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 DGAT1O75907 488 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 PAPLNO95428 1278 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 GLUD1P00367 558 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
COL5A1-207ENST00000469093 AKAP5P24588 427 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 CAPSQ13938 189 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 FRMD5Q7Z6J6 570 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 PALB2Q86YC2 1186 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 SIX5Q8N196 739 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 SLC44A3Q8N4M1 653 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-207ENST00000469093 B3GALT6Q96L58 329 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 APOL6Q9BWW8 343 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 GPR62Q9BZJ7 368 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 ANKEF1Q9NU02 776 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-207ENST00000469093 WNT16Q9UBV4 365 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 FBXL21Q9UKT6 434 aa13.62□□□□□ -0.23
COL5A1-207ENST00000469093 A0A087WWV3 80 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 A0A1B0GUA9 196 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 B4GALT5O43286 388 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 C1RP00736 705 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 GLRA2P23416 452 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 GBP2P32456 591 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 RARRES1P49788 294 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 LILRA6Q6PI73 481 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 CDR2LQ86X02 465 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 CCDC105Q8IYK2 499 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 GPR65Q8IYL9 337 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 RABGGTAQ92696 567 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 STAMQ92783 540 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 NKD2Q969F2 451 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 MYADMQ96S97 322 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 RTP3Q9BQQ7 232 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 NFKBIZQ9BYH8 718 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 KLK14Q9P0G3 267 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 EP300Q09472 2414 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-207ENST00000469093 GVINP1Q7Z2Y8 2422 aa13.61□□□□□ -0.23
COL5A1-207ENST00000469093 C2orf16Q68DN1 1984 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 KRBA1A5PL33 1030 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 TGM5O43548 720 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 CFHP08603 1231 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 XRCC6P12956 609 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL5A1-207ENST00000469093 KRT2P35908 639 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 CALCRLQ16602 461 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 FUT10Q6P4F1 479 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 DENND4AQ7Z401 1863 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 DTWD2Q8NBA8 298 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 WASF1Q92558 559 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 TRIM6Q9C030 488 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-207ENST00000469093 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 CLUHO75153 1309 aa13.6□□□□□ -0.23
COL5A1-207ENST00000469093 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 WNT7AO00755 349 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 TADA2AO75478 443 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 NPTXRO95502 500 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 LAMP2P13473 410 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 RPL17P18621 184 aaKnown RBP13.59□□□□□ -0.23
COL5A1-207ENST00000469093 TXKP42681 527 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 ANGPT1Q15389 498 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-207ENST00000469093 NXPE3Q969Y0 559 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 PRKD2Q9BZL6 878 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL5A1-207ENST00000469093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL5A1-207ENST00000469093 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 ADAM28Q9UKQ2 775 aa13.59□□□□□ -0.23
COL5A1-207ENST00000469093 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 STK25O00506 426 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 SRFP11831 508 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 GRIK3Q13003 919 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 ADSSL1Q8N142 457 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 POLR3FQ9H1D9 316 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-207ENST00000469093 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
COL5A1-207ENST00000469093 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms