RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 ERLIN2O94905 339 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 HOXA11P31270 313 aaPredicted RBP13.99□□□□□ -0.17
RUNX1-213ENST00000469087 MCCD1P59942 119 aaPredicted RBP13.99□□□□□ -0.17
RUNX1-213ENST00000469087 MCL1Q07820 350 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 SEZ6Q53EL9 994 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 MPZL3Q6UWV2 235 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 INTS8Q75QN2 995 aaKnown RBP13.99□□□□□ -0.17
RUNX1-213ENST00000469087 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 MFSD14AQ96MC6 490 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
RUNX1-213ENST00000469087 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 LDHAP00338 332 aaKnown RBP13.98□□□□□ -0.17
RUNX1-213ENST00000469087 HARSP12081 509 aaKnown RBP13.98□□□□□ -0.17
RUNX1-213ENST00000469087 THPOP40225 353 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 VAMP7P51809 220 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 MGAT3Q09327 533 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 BFSP1Q12934 665 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
RUNX1-213ENST00000469087 DCAF17Q5H9S7 520 aaPredicted RBP13.98□□□□□ -0.17
RUNX1-213ENST00000469087 TCERG1LQ5VWI1 586 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 SENP6Q9GZR1 1112 aaPredicted RBP13.98□□□□□ -0.17
RUNX1-213ENST00000469087 PDZD7Q9H5P4 517 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
RUNX1-213ENST00000469087 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 M0QZ92 97 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 CTSHP09668 335 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 TRIM49P0CI25 452 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 TRIM49CP0CI26 452 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 KRT13P13646 458 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 TNFSF9P41273 254 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 KCNMA1Q12791 1236 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 C1orf220Q5T0J3 134 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 SPECC1LQ69YQ0 1117 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 PARD3BQ8TEW8 1205 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 NOC2LQ9Y3T9 749 aaKnown RBP13.97□□□□□ -0.17
RUNX1-213ENST00000469087 TRPV2Q9Y5S1 764 aa13.97□□□□□ -0.17
RUNX1-213ENST00000469087 OGTO15294 1046 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.17
RUNX1-213ENST00000469087 RPLP2P05387 115 aaKnown RBP13.96□□□□□ -0.17
RUNX1-213ENST00000469087 GJA8P48165 433 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 KLK7P49862 253 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 WNT7BP56706 349 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 NOLC1Q14978 699 aaKnown RBP eCLIP13.96□□□□□ -0.17
RUNX1-213ENST00000469087 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.17
RUNX1-213ENST00000469087 SYCP1Q15431 976 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 ZNF568Q3ZCX4 644 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 FKBP15Q5T1M5 1219 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 THNSL1Q8IYQ7 743 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 CEP120Q8N960 986 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
RUNX1-213ENST00000469087 CDT1Q9H211 546 aa13.96□□□□□ -0.17
RUNX1-213ENST00000469087 A0A1W2PQC6 194 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.18
RUNX1-213ENST00000469087 SFPQP23246 707 aaKnown RBP eCLIP13.96□□□□□ -0.18
RUNX1-213ENST00000469087 PPP3CAQ08209 521 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 NCBP1Q09161 790 aaKnown RBP13.96□□□□□ -0.18
RUNX1-213ENST00000469087 TBX2Q13207 712 aaPredicted RBP13.96□□□□□ -0.18
RUNX1-213ENST00000469087 ZNF618Q5T7W0 954 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 FAM228AQ86W67 206 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 TMC2Q8TDI7 906 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 SEZ6LQ9BYH1 1024 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.18
RUNX1-213ENST00000469087 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.18
RUNX1-213ENST00000469087 CD4P01730 458 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 MCF2P10911 925 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 CKBP12277 381 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 AXLP30530 894 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 FMO5P49326 533 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 ATN1P54259 1190 aaPredicted RBP13.95□□□□□ -0.18
RUNX1-213ENST00000469087 OSTNP61366 133 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 CBWD6Q4V339 395 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 CBWD3Q5JTY5 395 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 FAM26DQ5JW98 314 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 CBWD5Q5RIA9 395 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 SLC39A5Q6ZMH5 540 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 DIS3LQ8TF46 1054 aaKnown RBP13.95□□□□□ -0.18
RUNX1-213ENST00000469087 MMRN2Q9H8L6 949 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
RUNX1-213ENST00000469087 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
RUNX1-213ENST00000469087 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 ITIH6Q6UXX5 1313 aa13.95□□□□□ -0.18
RUNX1-213ENST00000469087 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
RUNX1-213ENST00000469087 RNF225M0QZC1 329 aaPredicted RBP13.94□□□□□ -0.18
RUNX1-213ENST00000469087 PTMAP06454 111 aaKnown RBP13.94□□□□□ -0.18
RUNX1-213ENST00000469087 COL6A1P12109 1028 aa13.94□□□□□ -0.18
RUNX1-213ENST00000469087 ARID5BQ14865 1188 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms