RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 FAM173BQ6P4H8 233 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 KCNT2Q6UVM3 1135 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 RNF169Q8NCN4 708 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
COL4A6-205ENST00000468338 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 C2orf40Q9H1Z8 148 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 ZSCAN16Q9H4T2 348 aaPredicted RBP12.32□□□□□ -0.44
COL4A6-205ENST00000468338 C17orf75Q9HAS0 396 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 PRMT7Q9NVM4 692 aaPredicted RBP12.32□□□□□ -0.44
COL4A6-205ENST00000468338 LZTS1Q9Y250 596 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 ACKR2O00590 384 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 B4GALT5O43286 388 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 GPR37L1O60883 481 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 FGF18O76093 207 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 BMP1P13497 986 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 TFF2Q03403 129 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 CABP7Q86V35 215 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 HSCBQ8IWL3 235 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 ZBTB8OSQ8IWT0 167 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 SYMPKQ92797 1274 aaKnown RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 KCNN1Q92952 543 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 COL25A1Q9BXS0 654 aaPredicted RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 IPPQ9Y573 584 aa12.31□□□□□ -0.44
COL4A6-205ENST00000468338 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
COL4A6-205ENST00000468338 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 MYH11P35749 1972 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 FSCN2O14926 492 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 NCK2O43639 380 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 HIP1RO75146 1068 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 EDN1P05305 212 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 IRS1P35568 1242 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 PPM1AP35813 382 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 UBA7P41226 1012 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 NPTX2P47972 431 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 EFNA5P52803 228 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 MAPK6Q16659 721 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 AAK1Q2M2I8 961 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 SPOUT1Q5T280 376 aaKnown RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 GSTCDQ8NEC7 633 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 IFT74Q96LB3 600 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 NRDE2Q9H7Z3 1164 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 RSAD1Q9HA92 442 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
COL4A6-205ENST00000468338 TCF20Q9UGU0 1960 aaKnown RBP12.3□□□□□ -0.44
COL4A6-205ENST00000468338 B4GALT3O60512 393 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 GALTP07902 379 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 LTBRP36941 435 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-205ENST00000468338 BCAR1P56945 870 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 ERVFC1P60507 584 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 HYAL1Q12794 435 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 NR6A1Q15406 480 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 ARSHQ5FYA8 562 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 PDE12Q6L8Q7 609 aaKnown RBP12.29□□□□□ -0.44
COL4A6-205ENST00000468338 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 THNSL1Q8IYQ7 743 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 DEPTORQ8TB45 409 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 DRC1Q96MC2 740 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 PDZD7Q9H5P4 517 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 UBE2ZQ9H832 354 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-205ENST00000468338 SPG21Q9NZD8 308 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms