RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PTPRJQ12913 1337 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 LRRIQ3A6PVS8 624 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 GPR32O75388 356 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 VTNP04004 478 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 NLRP11P59045 1033 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 ZBED6P86452 979 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF200P98182 395 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PPP2R3AQ06190 1150 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 POU5F1BQ06416 359 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PPFIA1Q13136 1202 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 MFSD10Q14728 455 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 FSCN1Q16658 493 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 REXO1L1PQ8IX06 675 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CCAR2Q8N163 923 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CCDC51Q96ER9 411 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 FAM84AQ96KN4 292 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CALR3Q96L12 384 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 NUP58Q9BVL2 599 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CDHR5Q9HBB8 845 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PLCB1Q9NQ66 1216 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 KLHL42Q9P2K6 505 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CNTNAP2Q9UHC6 1331 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 H0YCG3 227 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 GPR25O00155 361 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 HNRNPDLO14979 420 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 MSNP26038 577 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 VAMP7P51809 220 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CYP24A1Q07973 514 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 EPC2Q52LR7 807 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 KLHDC7AQ5VTJ3 777 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 HGSNATQ68CP4 663 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 C15orf39Q6ZRI6 1047 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 SDR16C5Q8N3Y7 309 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CCDC112Q8NEF3 446 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 LSM14BQ9BX40 385 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 REXO2Q9Y3B8 237 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 FANCGO15287 622 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PMM2O15305 246 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 MAGEB2O15479 319 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 SEPT4O43236 478 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CSDE1O75534 798 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 TPM2P07951 284 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PLEKP08567 350 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 ABCD1P33897 745 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PSEN2P49810 448 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 CPT1AP50416 773 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 JAM2P57087 298 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 SATB1Q01826 763 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 FAM187BQ17R55 369 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 NFRKBQ6P4R8 1299 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 GJB7Q6PEY0 223 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 TRIM65Q6PJ69 517 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 ZPBP2Q6X784 338 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 INTS8Q75QN2 995 aaKnown RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 METTL13Q8N6R0 699 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 KLHDC9Q8NEP7 349 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 POMGNT1Q8WZA1 660 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 TMEM117Q9H0C3 514 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 MMRN2Q9H8L6 949 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 TOPORSQ9NS56 1045 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-208ENST00000468300 PLAGL2Q9UPG8 496 aa8.99□□□□□ -0.97
BRCA1-208ENST00000468300 NRCAMQ92823 1304 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 A0A087WZ62 844 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 LRRC53A6NM62 1247 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ARHGAP6O43182 974 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 EXTL3O43909 919 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 PGK1P00558 417 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 TRIM21P19474 475 aaKnown RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 GPC3P51654 580 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 EFNA5P52803 228 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 MCL1Q07820 350 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 PDXDC1Q6P996 788 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 GPD1LQ8N335 351 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 OR8K1Q8NGG5 319 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 SEMA4DQ92854 862 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 NLRP4Q96MN2 994 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 JPH2Q9BR39 696 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 FDXACB1Q9BRP7 624 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 CEP72Q9P209 647 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ARHGAP20Q9P2F6 1191 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 LUC7L2Q9Y383 392 aaKnown RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 GRIN2DO15399 1336 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ASAP2O43150 1006 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ABL1P00519 1130 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 TNFSF9P41273 254 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ENPEPQ07075 957 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ASTE1Q2TB18 679 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 SEZ6Q53EL9 994 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 PHLDB3Q6NSJ2 640 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF296Q8WUU4 475 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-208ENST00000468300 PPP1R16BQ96T49 567 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 FBXL5Q9UKA1 691 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 FHOD1Q9Y613 1164 aa8.98□□□□□ -0.97
BRCA1-208ENST00000468300 ACKR2O00590 384 aa8.97□□□□□ -0.97
BRCA1-208ENST00000468300 ZNF263O14978 683 aa8.97□□□□□ -0.97
BRCA1-208ENST00000468300 TREHO43280 583 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms