RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 DACH1Q9UI36 760 aa18.67■□□□□ 0.58
VARS2-204ENST00000467717 A0A0B4J269 797 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 AMHP03971 560 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 GARTP22102 1010 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 KCNJ6P48051 423 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 WDR5P61964 334 aaKnown RBP18.66■□□□□ 0.58
VARS2-204ENST00000467717 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.66■□□□□ 0.58
VARS2-204ENST00000467717 HACE1Q8IYU2 909 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 UBE2OQ9C0C9 1292 aaKnown RBP18.66■□□□□ 0.58
VARS2-204ENST00000467717 HAPLN2Q9GZV7 340 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 ANO10Q9NW15 660 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
VARS2-204ENST00000467717 TRAF3IP3Q9Y228 551 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 IPPQ9Y573 584 aa18.66■□□□□ 0.58
VARS2-204ENST00000467717 SYCE3A1L190 88 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 KIAA0391O15091 583 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 CALUO43852 315 aaPredicted RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 EOMESO95936 686 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 HARSP12081 509 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 STX1AQ16623 288 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 ZSCAN23Q3MJ62 389 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 CT47A1Q5JQC4 288 aaPredicted RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 KLHL10Q6JEL2 608 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 ARMCX5Q6P1M9 558 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 MRPL10Q7Z7H8 261 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 C12orf56Q8IXR9 622 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 TMEM174Q8WUU8 243 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 P2RX5Q93086 422 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 PGBD4Q96DM1 585 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 CBWD1Q9BRT8 395 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 MSTO1Q9BUK6 570 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 ELAC1Q9H777 363 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 AGO2Q9UKV8 859 aaKnown RBP18.65■□□□□ 0.58
VARS2-204ENST00000467717 TET1Q8NFU7 2136 aa18.65■□□□□ 0.58
VARS2-204ENST00000467717 LAMA3Q16787 3333 aa18.64■□□□□ 0.58
VARS2-204ENST00000467717 CLIC2O15247 247 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 STAG3L1P0CL83 205 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 IBSPP21815 317 aaPredicted RBP18.64■□□□□ 0.57
VARS2-204ENST00000467717 CCNE1P24864 410 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 BMP8BP34820 402 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 LRRC63Q05C16 580 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 TYRO3Q06418 890 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 PAK1Q13153 545 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 KYAT1Q16773 422 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 ZCWPW2Q504Y3 356 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 C9orf50Q5SZB4 431 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 RASIP1Q5U651 963 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 ZNF598Q86UK7 904 aaKnown RBP18.64■□□□□ 0.57
VARS2-204ENST00000467717 NPAS4Q8IUM7 802 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 NELFBQ8WX92 580 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 TSG101Q99816 390 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 NXF3Q9H4D5 531 aaKnown RBP18.64■□□□□ 0.57
VARS2-204ENST00000467717 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 HSPBP1Q9NZL4 362 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
VARS2-204ENST00000467717 PCDHB7Q9Y5E2 793 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
VARS2-204ENST00000467717 SIP14410 1827 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 A0A1W2PPC1 479 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 BICDL2A1A5D9 508 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 SOX1O00570 391 aaPredicted RBP18.63■□□□□ 0.57
VARS2-204ENST00000467717 OGTO15294 1046 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 LDHAP00338 332 aaKnown RBP18.63■□□□□ 0.57
VARS2-204ENST00000467717 NR3C1P04150 777 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 CCDC192P0DO97 292 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 ITGA4P13612 1032 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 GRM5P41594 1212 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 DEFB103AP81534 67 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 MYBPC2Q14324 1141 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 SHHQ15465 462 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 NFIL3Q16649 462 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 EDRF1Q3B7T1 1238 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 THNSL1Q8IYQ7 743 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 CRIPAKQ8N1N5 446 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 RNF169Q8NCN4 708 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 TOP1MTQ969P6 601 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 RNPC3Q96LT9 517 aaKnown RBP18.63■□□□□ 0.57
VARS2-204ENST00000467717 CCDC94Q9BW85 323 aaPredicted RBP18.63■□□□□ 0.57
VARS2-204ENST00000467717 PCIF1Q9H4Z3 704 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 RWDD2AQ9UIY3 292 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 LRFN2Q9ULH4 789 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 CTNND2Q9UQB3 1225 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 HES2Q9Y543 173 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
VARS2-204ENST00000467717 MYH11P35749 1972 aa18.62■□□□□ 0.57
VARS2-204ENST00000467717 EXTL3O43909 919 aa18.62■□□□□ 0.57
VARS2-204ENST00000467717 FAM189A1O60320 539 aa18.62■□□□□ 0.57
VARS2-204ENST00000467717 CLTAP09496 248 aa18.62■□□□□ 0.57
VARS2-204ENST00000467717 ATF7P17544 494 aaPredicted RBP18.62■□□□□ 0.57
VARS2-204ENST00000467717 RPL13P26373 211 aaKnown RBP18.62■□□□□ 0.57
VARS2-204ENST00000467717 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
VARS2-204ENST00000467717 PMS1P54277 932 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms