RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF687Q8N1G0 1237 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 CCDC82Q8N4S0 544 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 FAM3CQ92520 227 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 GATA6Q92908 595 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 NLRP4Q96MN2 994 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 PLA2G2FQ9BZM2 168 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 BRD9Q9H8M2 597 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
HDAC3-203ENST00000467533 AKAP13Q12802 2813 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 DSPP15924 2871 aaKnown RBP11.51□□□□□ -0.57
HDAC3-203ENST00000467533 GIPC1O14908 333 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 ZNF862O60290 1169 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 EPN2O95208 641 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 RXRAP19793 462 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 HOXA9P31269 272 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 MLH1P40692 756 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 DNM2P50570 870 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 ADCY7P51828 1080 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 GRM2Q14416 872 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 PRSS55Q6UWB4 352 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-203ENST00000467533 NFXL1Q6ZNB6 911 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 MRPL10Q7Z7H8 261 aaKnown RBP11.51□□□□□ -0.57
HDAC3-203ENST00000467533 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 COLEC11Q9BWP8 271 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 HCFC1R1Q9NWW0 138 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-203ENST00000467533 MRPS23Q9Y3D9 190 aaKnown RBP11.51□□□□□ -0.57
HDAC3-203ENST00000467533 NOTCH4Q99466 2003 aa11.51□□□□□ -0.57
HDAC3-203ENST00000467533 IGLV3-22A0A075B6J6 115 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 WDR64B1ANS9 1081 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 TOP3BO95985 862 aaKnown RBP11.5□□□□□ -0.57
HDAC3-203ENST00000467533 ITGA4P13612 1032 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SCNN1GP51170 649 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 ANTXR2P58335 489 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-203ENST00000467533 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 WWC2Q6AWC2 1192 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 TANGO2Q6ICL3 276 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 GPR65Q8IYL9 337 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SPEM1Q8N4L4 309 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SLC7A14Q8TBB6 771 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 ELSPBP1Q96BH3 223 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SCNM1Q9BWG6 230 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 GPR62Q9BZJ7 368 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 SMOC1Q9H4F8 434 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 UBN1Q9NPG3 1134 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 ADAM28Q9UKQ2 775 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 KCNH3Q9ULD8 1083 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 PIAS3Q9Y6X2 628 aa11.5□□□□□ -0.57
HDAC3-203ENST00000467533 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-203ENST00000467533 ADAMTS20P59510 1910 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 E7EWF7 191 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 K7ESF4 209 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 CYP21A2P08686 494 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 DSC1Q08554 894 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 LRRC32Q14392 662 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 GAS6Q14393 721 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 UGCGQ16739 394 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 GAD1Q99259 594 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 EDEM2Q9BV94 578 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 GDE1Q9NZC3 331 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 SUCLA2Q9P2R7 463 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-203ENST00000467533 DNMT3BQ9UBC3 853 aaKnown RBP11.49□□□□□ -0.57
HDAC3-203ENST00000467533 WASF3Q9UPY6 502 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 SPAG17Q6Q759 2223 aa11.49□□□□□ -0.57
HDAC3-203ENST00000467533 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
HDAC3-203ENST00000467533 ARL5CA6NH57 179 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CCDC69A6NI79 296 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CHMP2AO43633 222 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 PAPSS2O95340 614 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CHRNB1P11230 501 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CEBPBP17676 345 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 MPLP40238 635 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 PTGDRQ13258 359 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 PSMD5Q16401 504 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 UBXN11Q5T124 520 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 WDR5BQ86VZ2 330 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 IRF7Q92985 503 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 SH2D3AQ9BRG2 576 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
HDAC3-203ENST00000467533 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
HDAC3-203ENST00000467533 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.579e-6■■■■■ 68.9
HDAC3-203ENST00000467533 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
HDAC3-203ENST00000467533 TADA2AO75478 443 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms