RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 ANKFY1Q9P2R3 1169 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 A0A1B0GUA9 196 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 GTPBP10A4D1E9 387 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 LRRIQ3A6PVS8 624 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 DNM1LO00429 736 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 PES1O00541 588 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 EPHB6O15197 1021 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CLDN3O15551 220 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 LDHAP00338 332 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 PTMAP06454 111 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 TNFSF9P41273 254 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 FMO5P49326 533 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 ACOT2P49753 483 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 FXR1P51114 621 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CRYBB1P53674 252 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 GSDMDP57764 484 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 MRPS6P82932 125 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 NOLC1Q14978 699 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 PSMD6Q15008 389 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 PTGISQ16647 500 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CBWD6Q4V339 395 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 SEZ6Q53EL9 994 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 FIGNQ5HY92 759 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CBWD3Q5JTY5 395 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CBWD5Q5RIA9 395 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 FBXO46Q6PJ61 603 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 ZBTB33Q86T24 672 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CDR2LQ86X02 465 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 LRRC8AQ8IWT6 810 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 TC2NQ8N9U0 490 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 TMC2Q8TDI7 906 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CPB2Q96IY4 423 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 ZNF333Q96JL9 665 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 DEFB118Q96PH6 123 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CELF4Q9BZC1 486 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CRISPLD2Q9H0B8 497 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 TRMT13Q9NUP7 481 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 CPSF3Q9UKF6 684 aaKnown RBP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL4A1-202ENST00000467182 TRPV2Q9Y5S1 764 aa14.15□□□□□ -0.14
COL4A1-202ENST00000467182 A0A0U1RQG5 324 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 ZNF233A6NK53 670 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 OGTO15294 1046 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 PMM2O15305 246 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 MEFVO15553 781 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 NOL4O94818 638 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 CHRNA1P02708 482 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 HSPA1AP0DMV8 641 aaKnown RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 HSPA1BP0DMV9 641 aaKnown RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 MCF2P10911 925 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 KRT13P13646 458 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 EIF4BP23588 611 aaKnown RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 CASP14P31944 242 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 CDK7P50613 346 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 LBX1P52954 281 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 CLDN10P78369 228 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 LRMPQ12912 555 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 PTK7Q13308 1070 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 TRIM14Q14142 442 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 PCBP1Q15365 356 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 ZNF568Q3ZCX4 644 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 BRSK2Q8IWQ3 736 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 ARMC5Q96C12 935 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 SENP6Q9GZR1 1112 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 RNF208Q9H0X6 261 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 GANQ9H2C0 597 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 STARD7Q9NQZ5 370 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 CDY2AQ9Y6F7 541 aa14.14□□□□□ -0.15
COL4A1-202ENST00000467182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL4A1-202ENST00000467182 TTC26A0AVF1 554 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 KBTBD13C9JR72 458 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 ARVCFO00192 962 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 B4GALT4O60513 344 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 MFAP3LO75121 409 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 HARSP12081 509 aaKnown RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 SLC9A1P19634 815 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 ADKP55263 362 aaKnown RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CCZ1BP86790 482 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CCZ1P86791 482 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 APBA1Q02410 837 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 FAM26DQ5JW98 314 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 C15orf39Q6ZRI6 1047 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TMEM139Q8IV31 216 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TMEM192Q8IY95 271 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CEP120Q8N960 986 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CCDC150Q8NCX0 1101 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 LMO3Q8TAP4 145 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 POP1Q99575 1024 aaKnown RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CRACR2AQ9BSW2 395 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 NUP58Q9BVL2 599 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms