RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 SLC27A1Q6PCB7 646 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 FOXR2Q6PJQ5 311 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 APBB1IPQ7Z5R6 666 aaPredicted RBP11.73□□□□□ -0.53
NUP188-204ENST00000467044 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 C12orf56Q8IXR9 622 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 THNSL1Q8IYQ7 743 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 XXYLT1Q8NBI6 393 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 CEP63Q96MT8 703 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 TRIM6Q9C030 488 aaPredicted RBP11.73□□□□□ -0.53
NUP188-204ENST00000467044 HAPLN2Q9GZV7 340 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 CDT1Q9H211 546 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 PTPRHQ9HD43 1115 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
NUP188-204ENST00000467044 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
NUP188-204ENST00000467044 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 STYXL1Q9Y6J8 313 aa11.73□□□□□ -0.53
NUP188-204ENST00000467044 A0A0B4J269 797 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 KIAA0391O15091 583 aaKnown RBP11.72□□□□□ -0.53
NUP188-204ENST00000467044 OGTO15294 1046 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
NUP188-204ENST00000467044 MCF2P10911 925 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 EPB41P11171 864 aaKnown RBP11.72□□□□□ -0.53
NUP188-204ENST00000467044 PROZP22891 400 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 ITGB8P26012 769 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 CASP4P49662 377 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 ACOT2P49753 483 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 OSTNP61366 133 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 MCL1Q07820 350 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 GPNMBQ14956 572 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 FILIP1Q7Z7B0 1213 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 SLC9A9Q8IVB4 645 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 GPD1LQ8N335 351 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 DBF4BQ8NFT6 615 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 SEPT8Q92599 483 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 ADAM2Q99965 735 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 APOL6Q9BWW8 343 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 EIF2AQ9BY44 585 aaKnown RBP11.72□□□□□ -0.53
NUP188-204ENST00000467044 TMX1Q9H3N1 280 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 CHST12Q9NRB3 414 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 DMAC2Q9NW81 257 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
NUP188-204ENST00000467044 TET1Q8NFU7 2136 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 ABLIM1O14639 778 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 EXTL3O43909 919 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 MGEA5O60502 916 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 AKAP3O75969 853 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 SYN1P17600 705 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 RFC2P35250 354 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 PSMC2P35998 433 aaKnown RBP11.71□□□□□ -0.53
NUP188-204ENST00000467044 MTIF2P46199 727 aaKnown RBP11.71□□□□□ -0.53
NUP188-204ENST00000467044 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 CBWD2Q8IUF1 395 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 ZC3H3Q8IXZ2 948 aaKnown RBP11.71□□□□□ -0.53
NUP188-204ENST00000467044 FAM186BQ8IYM0 893 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 CEP120Q8N960 986 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 CCDC51Q96ER9 411 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 CNOT6LQ96LI5 555 aaKnown RBP11.71□□□□□ -0.53
NUP188-204ENST00000467044 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
NUP188-204ENST00000467044 GOLGA6L3A6NEY3 463 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 ZNF233A6NK53 670 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 KCNJ18B7U540 433 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 GNA14O95837 355 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 CXCL10P02778 98 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 KRT13P13646 458 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 CSF2RAP15509 400 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 TNFSF9P41273 254 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 KCNJ12Q14500 433 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 DSC3Q14574 896 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 SNRNP35Q16560 246 aaKnown RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 ZBTB41Q5SVQ8 909 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 UBXN11Q5T124 520 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 RPUSD2Q8IZ73 545 aaKnown RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 APBB2Q92870 758 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 ACAP3Q96P50 834 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 CCDC94Q9BW85 323 aaPredicted RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 FTHL17Q9BXU8 183 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 RPF1Q9H9Y2 349 aaKnown RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 FAM105AQ9NUU6 356 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 SNTG2Q9NY99 539 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 ZMYND8Q9ULU4 1186 aaPredicted RBP11.7□□□□□ -0.54
NUP188-204ENST00000467044 HES2Q9Y543 173 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
NUP188-204ENST00000467044 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
NUP188-204ENST00000467044 ADRB2P07550 413 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms