RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 CHFRQ96EP1 664 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 DHRS1Q96LJ7 313 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 MFSD14AQ96MC6 490 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 USP28Q96RU2 1077 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 MCM9Q9NXL9 1143 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 PCDHA7Q9UN72 937 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 AGTPBP1Q9UPW5 1226 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 NOSIPQ9Y314 301 aaKnown RBP4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 TNPO3Q9Y5L0 923 aaKnown RBP4.82□□□□□ -1.64
CLCA3P-202ENST00000466454 ITGB4P16144 1822 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GOLGA6L4A6NEF3 574 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GJB3O75712 270 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SNUPNO95149 360 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 HNRNPLP14866 589 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CPEP16870 476 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GUCY2CP25092 1073 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ELF1P32519 619 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PTK2Q05397 1052 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TUBB2AQ13885 445 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SLC39A14Q15043 492 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 LONRF2Q1L5Z9 754 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 E4F1Q66K89 784 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 LMBR1LQ6UX01 489 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CEP97Q8IW35 865 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 C17orf53Q8N3J3 647 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GLIS3Q8NEA6 775 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 USP6NLQ92738 828 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ERCC4Q92889 916 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 HSPBAP1Q96EW2 488 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TMEM237Q96Q45 408 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 WDR24Q96S15 920 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TUBB2BQ9BVA1 445 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GHITMQ9H3K2 345 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ARGLU1Q9NWB6 273 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 DUSP12Q9UNI6 340 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 KCNH4Q9UQ05 1017 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PHLPP1O60346 1717 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 MAST3O60307 1309 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GOLGA6L9A6NEM1 432 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 DISP2A7MBM2 1401 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GOLGA6L19H0YKK7 550 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CLTBP09497 229 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ARAFP10398 606 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 VCAM1P19320 739 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 DRG2P55039 364 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 LRMPQ12912 555 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SEMA5AQ13591 1074 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PTPAQ15257 358 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF423Q2M1K9 1284 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 RIC1Q4ADV7 1423 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CAVIN4Q5BKX8 364 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 FBXW10Q5XX13 1052 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 COPS6Q7L5N1 327 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SGMS1Q86VZ5 419 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 MYOCDQ8IZQ8 938 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 LRRC59Q96AG4 307 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ZC3H7BQ9UGR2 993 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SH3BGRL2Q9UJC5 107 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PRAMEF22A3QJZ6 481 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CCDC69A6NI79 296 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 MCF2LO15068 1137 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SART1O43290 800 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PPP1R12BO60237 982 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 MAFKO60675 156 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 E2F6O75461 281 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 MTRF1O75570 445 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 URI1O94763 535 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 DHRS4L1P0CG22 281 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TMOD1P28289 359 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PBX2P40425 430 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 NOP2P46087 812 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 CCDC38Q502W7 563 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 RESP18Q5W5W9 173 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TRIM65Q6PJ69 517 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TMEM139Q8IV31 216 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ANKRD35Q8N283 1001 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 LRRC43Q8N309 656 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 C1orf162Q8NEQ5 155 aaPredicted RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 UCMAQ8WVF2 138 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 TTC1Q99614 292 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 DBNDD2Q9BQY9 259 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 SIL1Q9H173 461 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 XAB2Q9HCS7 855 aaKnown RBP4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ZSWIM5Q9P217 1185 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 ITGB1BP2Q9UKP3 347 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
CLCA3P-202ENST00000466454 NUP98P52948 1817 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 GPR75-ASB3A0A0A6YYF3 556 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 A0A1W2PQH9 124 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 PGPEP1LA6NFU8 196 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 H3BQV1 296 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 ERVH48-1M5A8F1 160 aa4.8□□□□□ -1.64
CLCA3P-202ENST00000466454 GIPC1O14908 333 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms