RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 GDE1Q9NZC3 331 aa10.35□□□□□ -0.75
ABCF3-205ENST00000466416 SUCLA2Q9P2R7 463 aaPredicted RBP10.35□□□□□ -0.75
ABCF3-205ENST00000466416 FBXW11Q9UKB1 542 aa10.35□□□□□ -0.75
ABCF3-205ENST00000466416 NDRG2Q9UN36 371 aaKnown RBP10.35□□□□□ -0.75
ABCF3-205ENST00000466416 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 CHURC1-FNTBB4DL54 471 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 hCG_1984214I3L0E3 225 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 PAPSS2O95340 614 aaPredicted RBP10.34□□□□□ -0.75
ABCF3-205ENST00000466416 C8AP07357 584 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 ITGA4P13612 1032 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 FNTBP49356 437 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
ABCF3-205ENST00000466416 FUT10Q6P4F1 479 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 CEP68Q76N32 757 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 RHPN2Q8IUC4 686 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 NPAS3Q8IXF0 933 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 SPEM1Q8N4L4 309 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
ABCF3-205ENST00000466416 ZNF713Q8N859 430 aaPredicted RBP10.34□□□□□ -0.75
ABCF3-205ENST00000466416 FANCBQ8NB91 859 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 CRYGNQ8WXF5 182 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 ELSPBP1Q96BH3 223 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 LOXL4Q96JB6 756 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
ABCF3-205ENST00000466416 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 TRPV5Q9NQA5 729 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 POLIQ9UNA4 740 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 DOCK6Q96HP0 2047 aa10.34□□□□□ -0.75
ABCF3-205ENST00000466416 FRYQ5TBA9 3013 aa10.33□□□□□ -0.75
ABCF3-205ENST00000466416 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SRRM3A6NNA2 597 aaPredicted RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 CCL16O15467 120 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 MAFO75444 373 aaPredicted RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 RXRAP19793 462 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 HOXA11P31270 313 aaPredicted RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SFNP31947 248 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 LIFRP42702 1097 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SATB1Q01826 763 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SF3A2Q15428 464 aaKnown RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 XKR3Q5GH77 459 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 UBXN11Q5T124 520 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 FAM3CQ92520 227 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 IRF7Q92985 503 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 TMEM87BQ96K49 555 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 B3GALT6Q96L58 329 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 CEP89Q96ST8 783 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 PLA2G2FQ9BZM2 168 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 IL25Q9H293 177 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 BRD9Q9H8M2 597 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 IFT122Q9HBG6 1241 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 RXFP3Q9NSD7 469 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 ADAM28Q9UKQ2 775 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 MRPS23Q9Y3D9 190 aaKnown RBP10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
ABCF3-205ENST00000466416 SH2B2O14492 632 aaPredicted RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 AXIN1O15169 862 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 ZZEF1O43149 2961 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 PRC1O43663 620 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 TADA2AO75478 443 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 CHRNB1P11230 501 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 HOXA6P31267 233 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 MCM5P33992 734 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 JAK3P52333 1124 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 RING1Q06587 406 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 SRSF5Q13243 272 aaKnown RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 MTERF2Q49AM1 385 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 PRR16Q569H4 304 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 JAKMIP3Q5VZ66 844 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 TANGO2Q6ICL3 276 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 SMG8Q8ND04 991 aaKnown RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 MCRS1Q96EZ8 462 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 NLRP4Q96MN2 994 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 GAD1Q99259 594 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 CLSTN3Q9BQT9 956 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 TRMT61BQ9BVS5 477 aaKnown RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 MIOSQ9NXC5 875 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 BARHL2Q9NY43 387 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 DNMT3BQ9UBC3 853 aaKnown RBP10.32□□□□□ -0.76
ABCF3-205ENST00000466416 GIT1Q9Y2X7 761 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 TAF6LQ9Y6J9 622 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 IGF2RP11717 2491 aa10.32□□□□□ -0.76
ABCF3-205ENST00000466416 SDK1Q7Z5N4 2213 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 F8W810 466 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 K7ESF4 209 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 TAF4O00268 1085 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 CIITAP33076 1130 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 MLH1P40692 756 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 SCNN1GP51170 649 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 MLLT6P55198 1093 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 PTH1RQ03431 593 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms