RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CRNKL1Q9BZJ0 848 aaKnown RBP6.96□□□□□ -1.3
NCL-208ENST00000466274 C12orf49Q9H741 205 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 SLC38A10Q9HBR0 1119 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 RAVER2Q9HCJ3 691 aaKnown RBP6.96□□□□□ -1.3
NCL-208ENST00000466274 PDGFCQ9NRA1 345 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 FAM53CQ9NYF3 392 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 CLEC1BQ9P126 229 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 TRIOO75962 3097 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 GBF1Q92538 1859 aa6.96□□□□□ -1.3
NCL-208ENST00000466274 CHD6Q8TD26 2715 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 SMCHD1A6NHR9 2005 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 LOC102724159A0A0B4J2E5 919 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 GRM6O15303 877 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 LINC01565O15544 149 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 IDH1O75874 414 aaKnown RBP6.95□□□□□ -1.3
NCL-208ENST00000466274 AKR1B1P15121 316 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 GTF2F1P35269 517 aaKnown RBP eCLIP6.95□□□□□ -1.3
NCL-208ENST00000466274 AFMP43652 599 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 ATXN1P54253 815 aaKnown RBP6.95□□□□□ -1.3
NCL-208ENST00000466274 FGD1P98174 961 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 PWP2Q15269 919 aaKnown RBP6.95□□□□□ -1.3
NCL-208ENST00000466274 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 SFRP5Q5T4F7 317 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 SPOCD1Q6ZMY3 1216 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 CCDC105Q8IYK2 499 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 SEPT8Q92599 483 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 ASB16Q96NS5 453 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 IFIH1Q9BYX4 1025 aaKnown RBP6.95□□□□□ -1.3
NCL-208ENST00000466274 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 HOMER2Q9NSB8 354 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 FAM8A1Q9UBU6 413 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 COL4A4P53420 1690 aaPredicted RBP6.95□□□□□ -1.3
NCL-208ENST00000466274 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
NCL-208ENST00000466274 E9PSI1 815 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 H3BS24 57 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 CBX7O95931 251 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 AOC1P19801 751 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 ETF1P62495 437 aaKnown RBP6.94□□□□□ -1.3
NCL-208ENST00000466274 LMNB2Q03252 620 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 G3BP1Q13283 466 aaKnown RBP eCLIP6.94□□□□□ -1.39e-14■■□□□ 12.6
NCL-208ENST00000466274 PPP2R5BQ15173 497 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 MFSD4AQ8N468 514 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 C7orf31Q8N865 590 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 DBF4BQ8NFT6 615 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 SUSD6Q92537 303 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 GAL3ST3Q96A11 431 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 CDCA3Q99618 268 aaPredicted RBP6.94□□□□□ -1.3
NCL-208ENST00000466274 A1CFQ9NQ94 594 aaKnown RBP6.94□□□□□ -1.3
NCL-208ENST00000466274 SMC4Q9NTJ3 1288 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
NCL-208ENST00000466274 ADD3Q9UEY8 706 aaKnown RBP6.94□□□□□ -1.3
NCL-208ENST00000466274 RALYQ9UKM9 306 aaKnown RBP6.94□□□□□ -1.3
NCL-208ENST00000466274 RSPH10B2B2RC85 870 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 B4DLN1 442 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 F5H6K3 240 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 SRGAP3O43295 1099 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 RSPH10BP0C881 870 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 PTGS1P23219 599 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 NRIP1P48552 1158 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 MRPL12P52815 198 aaKnown RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 PDE4BQ07343 736 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 KLRC3Q07444 240 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 TCTN1Q2MV58 587 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 WIPI1Q5MNZ9 446 aaPredicted RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 ZNF618Q5T7W0 954 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 LETMD1Q6P1Q0 360 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 PRR23BQ6ZRT6 265 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 LRRC47Q8N1G4 583 aaKnown RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 DHX38Q92620 1227 aaKnown RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 APBB2Q92870 758 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 P2RX5Q93086 422 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 ZNF512BQ96KM6 892 aaPredicted RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 TLE6Q9H808 572 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 PIH1D3Q9NQM4 214 aaKnown RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 RNF146Q9NTX7 359 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
NCL-208ENST00000466274 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 PLXNA3P51805 1871 aa6.93□□□□□ -1.3
NCL-208ENST00000466274 DNAH14Q0VDD8 3507 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 DMDP11532 3685 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 KINO60870 393 aaKnown RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 CSPG5O95196 566 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 GLI1P08151 1106 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 CASTP20810 708 aaKnown RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 PLEKHG4Q58EX7 1191 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 PRAMEF13Q5VWM6 474 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 C22orf34Q6ZV56 151 aa6.92□□□□□ -1.3
NCL-208ENST00000466274 RBM23Q86U06 439 aaKnown RBP6.92□□□□□ -1.3
NCL-208ENST00000466274 NPAS4Q8IUM7 802 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms