RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 LRFN2Q9ULH4 789 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 TRPV2Q9Y5S1 764 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
HDAC6-215ENST00000465457 BICDL2A1A5D9 508 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 MSH4O15457 936 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 NRDCO43847 1150 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 FGFR1P11362 822 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 KCNA2P16389 499 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 NPR3P17342 541 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 CDK11BP21127 795 aaKnown RBP15.22■□□□□ 0.03
HDAC6-215ENST00000465457 RPA1P27694 616 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 UBASH3AP57075 661 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 SPIRE1Q08AE8 756 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 TPD52L1Q16890 204 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-215ENST00000465457 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 KIAA2013Q8IYS2 634 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 SLC5A5Q92911 643 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 PCYT2Q99447 389 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 RIT2Q99578 217 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 POLR3CQ9BUI4 534 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-215ENST00000465457 XPO4Q9C0E2 1151 aaKnown RBP15.22■□□□□ 0.03
HDAC6-215ENST00000465457 MFSD1Q9H3U5 465 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 CWH43Q9H720 699 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
HDAC6-215ENST00000465457 TYW1Q9NV66 732 aaKnown RBP15.22■□□□□ 0.03
HDAC6-215ENST00000465457 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 MEIS1O00470 390 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 INSRRP14616 1297 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 CASP1P29466 404 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 PPP2R5CQ13362 524 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 ANGPT1Q15389 498 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 CDKAL1Q5VV42 579 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 DGLUCYQ7Z3D6 616 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 C12orf76Q8N812 135 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-215ENST00000465457 CNTNAP3BQ96NU0 1288 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 PLIN2Q99541 437 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 CNTNAP3Q9BZ76 1288 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 TUFT1Q9NNX1 390 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 ENTPD7Q9NQZ7 604 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 LIMD1Q9UGP4 676 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 VAV3Q9UKW4 847 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 NR2E1Q9Y466 385 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 HCFC2Q9Y5Z7 792 aa15.21■□□□□ 0.03
HDAC6-215ENST00000465457 KIF20AO95235 890 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
HDAC6-215ENST00000465457 NFX1Q12986 1120 aaKnown RBP15.2■□□□□ 0.02
HDAC6-215ENST00000465457 FILIP1LQ4L180 1135 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 KLHL10Q6JEL2 608 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 NELFBQ8WX92 580 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 GLG1Q92896 1179 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 SENP7Q9BQF6 1050 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 CELF4Q9BZC1 486 aaKnown RBP15.2■□□□□ 0.02
HDAC6-215ENST00000465457 CDHR5Q9HBB8 845 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
HDAC6-215ENST00000465457 GAS7O60861 476 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 STAM2O75886 525 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 ATP1A3P13637 1013 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 AOC1P19801 751 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 CLCN5P51795 746 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 MCM6Q14566 821 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 IER5Q5VY09 327 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 CCDC186Q7Z3E2 898 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 FAM114A1Q8IWE2 563 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 LRRC15Q8TF66 581 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 PPP1R16BQ96T49 567 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 ADAM7Q9H2U9 754 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 KIAA1024Q9UPX6 916 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 DNM3Q9UQ16 869 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 GINS2Q9Y248 185 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
HDAC6-215ENST00000465457 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 R4GN57 208 aa15.19■□□□□ 0.02
HDAC6-215ENST00000465457 MYMKA6NI61 221 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 C9IYK1 514 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 PSMD10O75832 226 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 HOXB8P17481 243 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-215ENST00000465457 ITGB5P18084 799 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 EEF1GP26641 437 aaKnown RBP15.18■□□□□ 0.02
HDAC6-215ENST00000465457 PRCPP42785 496 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 PLCB4Q15147 1175 aa15.18■□□□□ 0.02
HDAC6-215ENST00000465457 RARS2Q5T160 578 aaKnown RBP15.18■□□□□ 0.02
HDAC6-215ENST00000465457 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms